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BaseInfo

ncRNA ID novel_zma_miR7662
Species Zea mays
Class miRNA
Genome position Chr9:60754484-60754545 [-]
Reference genome RefGen_v4
Source SRR3341856
Length 20
Mature sequence(if miRNA) 43 - UAUCCGAUCCGACAAGACCC - 62
Stem-loop(if miRNA) --        CC    A ACCC       AAU
  UAUCCGAU  GACA G    GCGGGUG   U
  ||||||||  |||| |    |||||||
  AUGGGCUA  CUGU C    UGCUCAU   U
GC        -C    A -CUA       CUU
Stem-loop sequence UAUCCGAUCCGACAAGACCCGCGGGUGAAUUUUUCUACUCGUAUCCAUGUCCAUCGGGUACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008678309.2
ncRNA:20   CCCAGAACAGCCUAGCCUAU   1
  *|*|||||||||||||*|||
targets:2225   UGUUCUUGUCGGAUCGCAUA   2244

2.5 PREDICTED: Zea mays uncharacterized LOC100193195 (COL14), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008678308.2
ncRNA:20   CCCAGAACAGCCUAGCCUAU   1
  *|*|||||||||||||*|||
targets:2996   UGUUCUUGUCGGAUCGCAUA   3015

2.5 PREDICTED: Zea mays uncharacterized LOC100193195 (COL14), transcript variant X1, mRNA NA coding protein psRNATarget