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BaseInfo

ncRNA ID osa-miRf10363-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UGGCACGGUGCCAGUUUCCCU - NA
Stem-loop(if miRNA)     A       A       AAA               CG            CCCUUAGAC   GGACCCACAUGUCAGUCCCAUCUUCCUCC
CUGG AUUUGGG AAAUUGG   CGUGCCACUCCGUCG  UUUUCCGUCAGA         AUG                             A
|||| ||||||| |||||||   |||||||||||||||  ||||||||||||         |||
GACC UAAAUCC UUUGACC   GCACGGUGAGGCAGU  AAAAGGUAGUUU         AGA                             U
    G       C       GUG               AU            -------UU   UGCAACAUACACCCCUUCUUUCCUCCCCC
Stem-loop sequence CUGGAAUUUGGGAAAAUUGGAAACGUGCCACUCCGUCGCGUUUUCCGUCAGACCCUUAGACAUGGGACCCACAUGUCAGUCCCAUCUUCCUCCAUCCCCCUCCUUUCUUCCCCACAUACAACGUAGAUUUUUGAUGGAAAAUAUGACGGAGUGGCACGGUGCCAGUUUCCCUAAAUGCCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK105082.1
ncRNA:21   UCCCUUUGACCGUGGCACGGU   1
  |*||*||||||||||||||||
targets:105   AUGGUAACUGGCACCGUGCCA   125

1.0 Oryza sativa Japonica Group cDNA clone:001-046-C08, full insert sequence NA coding protein psRNATarget
AK073066.1
ncRNA:21   UCCCUUUGACCGUGGCACGGU   1
  |*||*||||||||||||||||
targets:479   AUGGUAACUGGCACCGUGCCA   499

1.0 Oryza sativa Japonica Group cDNA clone:J033023L01, full insert sequence NA coding protein psRNATarget
XM_015779939.1
ncRNA:21   UCCCUUUGACCGUGGCACGGU   1
  |*||*||||||||||||||||
targets:1549   AUGGUAACUGGCACCGUGCCA   1569

1.0 PREDICTED: Oryza sativa Japonica Group plasma membrane ATPase (LOC4337257), mRNA plasma membrane ATPase(LOC4337257) coding protein psRNATarget
AK100435.1
ncRNA:21   UCCCUUUGACCGUGGCACGGU   1
  |*||*||||||||||||||||
targets:1550   AUGGUAACUGGCACCGUGCCA   1570

1.0 Oryza sativa Japonica Group cDNA clone:J023088J16, full insert sequence NA coding protein psRNATarget