ncRNA ID | osa-miRf10363-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UGGCACGGUGCCAGUUUCCCU - NA |
Stem-loop(if miRNA) |
    A       A       AAA               CG            CCCUUAGAC   GGACCCACAUGUCAGUCCCAUCUUCCUCC CUGG AUUUGGG AAAUUGG   CGUGCCACUCCGUCG  UUUUCCGUCAGA         AUG                             A |||| ||||||| |||||||   |||||||||||||||  ||||||||||||         ||| GACC UAAAUCC UUUGACC   GCACGGUGAGGCAGU  AAAAGGUAGUUU         AGA                             U     G       C       GUG               AU            -------UU   UGCAACAUACACCCCUUCUUUCCUCCCCC |
Stem-loop sequence | CUGGAAUUUGGGAAAAUUGGAAACGUGCCACUCCGUCGCGUUUUCCGUCAGACCCUUAGACAUGGGACCCACAUGUCAGUCCCAUCUUCCUCCAUCCCCCUCCUUUCUUCCCCACAUACAACGUAGAUUUUUGAUGGAAAAUAUGACGGAGUGGCACGGUGCCAGUUUCCCUAAAUGCCAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK105082.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:001-046-C08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK073066.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:J033023L01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015779939.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group plasma membrane ATPase (LOC4337257), mRNA | plasma membrane ATPase(LOC4337257) | coding protein | psRNATarget | |||||||||
AK100435.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:J023088J16, full insert sequence | NA | coding protein | psRNATarget |