ncRNA ID | novel_zma_miR7656 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:13039381-13039540 [+] |
Reference genome | RefGen_v4 |
Source | SRR3341856 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGGCCGCCGAAAAUAACUGC - 21 |
Stem-loop(if miRNA) |
--                  U                   ACAC                --G   C     A     UCU   UUGGCCGCCGAAAAUAAC GCUUGUUUUCGGCGGCCUG    AGCCGCCGAAAAUAAC   UUA UUUCG CGGCU   G   |||||||||||||||||| |||||||||||||||||||    ||||||||||||||||   ||| ||||| |||||   GAUCGGCGGCUUUUAUUG CGAAUAAAAGCCGCCGGGC    UCGGCGGCUUUUAUUG   AAU AAAGC GCCGA   A CC                  U                   CCGA                ACG   A     C     CAC |
Stem-loop sequence | UUGGCCGCCGAAAAUAACUGCUUGUUUUCGGCGGCCUGACACAGCCGCCGAAAAUAACGUUACUUUCGACGGCUUCUGACACAGCCGCCGAAAAUAAGCAGUUAUUUUCGGCGGCUAGCCCGGGCCGCCGAAAAUAAGCUGUUAUUUUCGGCGGCUAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020545234.1 |
|
2.0 | PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA | NA | coding protein | psRNATarget |