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BaseInfo

ncRNA ID	novel_zma_miR7653
Species	Zea mays
Class	miRNA
Genome position	Chr1:57328887-57328950 [+]
Reference genome	RefGen_v4
Source	SRR3341856
Length	21
Mature sequence(if miRNA)	1 - UUUCUUUUUAUUUGUCGCUAG - 21
Stem-loop(if miRNA)	--                 CUA         A   UUUCUUUUUAUUUGUCG   GAUAGUGCA A   |||||||||||||||||   |||||||||   AAAGAAAAAUAAACAGC   CUAUCACGU A GC                 AAC         U
Stem-loop sequence	UUUCUUUUUAUUUGUCGCUAGAUAGUGCAAAAUUGCACUAUCCAACGACAAAUAAAAAGAAACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170077.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||||||||||||||| targets:56   CUAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 7741 from Patent EP2559767	NA	coding protein	psRNATarget
HI409616.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||||||||||||||| targets:56   CUAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 7741 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241746.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||||||||||||||| targets:56   CUAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 7741 from Patent EP2985353	NA	coding protein	psRNATarget
HI403385.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||*|||||||||||| targets:47   CUAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1510 from Patent EP2074227	NA	coding protein	psRNATarget
JB163846.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||*|||||||||||| targets:47   CUAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1510 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235515.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||*|||||||||||| targets:47   CUAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1510 from Patent EP2985353	NA	coding protein	psRNATarget
JB166291.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||*|||||||||||| targets:52   CUAGCGACUAAUAAAAAGAAA   72 Target Full Sequence	1.5	Sequence 3955 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237960.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||*|||||||||||| targets:52   CUAGCGACUAAUAAAAAGAAA   72 Target Full Sequence	1.5	Sequence 3955 from Patent EP2985353	NA	coding protein	psRNATarget
HI405830.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||||||||*|||||||||||| targets:52   CUAGCGACUAAUAAAAAGAAA   72 Target Full Sequence	1.5	Sequence 3955 from Patent EP2074227	NA	coding protein	psRNATarget
HI410015.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:56   CCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:56   CCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
JB169079.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:56   CCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
JB170476.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:56   CCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
HI408618.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:56   CCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:56   CCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:63   CCAGCGACAAAUAAAAAGAAA   83 Target Full Sequence	0.0	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
HI403279.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:63   CCAGCGACAAAUAAAAAGAAA   83 Target Full Sequence	0.0	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
JB163740.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:63   CCAGCGACAAAUAAAAAGAAA   83 Target Full Sequence	0.0	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
JB163862.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:63   CCAGCGACAAAUAAAAAGAAA   83 Target Full Sequence	0.0	Sequence 1526 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235531.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:63   CCAGCGACAAAUAAAAAGAAA   83 Target Full Sequence	0.0	Sequence 1526 from Patent EP2985353	NA	coding protein	psRNATarget
HI403401.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:63   CCAGCGACAAAUAAAAAGAAA   83 Target Full Sequence	0.0	Sequence 1526 from Patent EP2074227	NA	coding protein	psRNATarget
EZ061437.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:220   CCAGCGACAAAUAAAAAGAAA   240 Target Full Sequence	0.0	TSA: Zea mays contig62559, mRNA sequence	NA	coding protein	psRNATarget
BT060817.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:282   CCAGCGACAAAUAAAAAGAAA   302 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1218   CCAGCGACAAAUAAAAAGAAA   1238 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1340   CCAGCGACAAAUAAAAAGAAA   1360 Target Full Sequence	0.0	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1340   CCAGCGACAAAUAAAAAGAAA   1360 Target Full Sequence	0.0	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:193   CCAGCGACAAAUAAAAAGAAA   213 Target Full Sequence	0.0	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1407   CCAGCGACAAAUAAAAAGAAA   1427 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1324   CCAGCGACAAAUAAAAAGAAA   1344 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1579   CCAGCGACAAAUAAAAAGAAA   1599 Target Full Sequence	0.0	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:1595   CCAGCGACAAAUAAAAAGAAA   1615 Target Full Sequence	0.0	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
EU957018.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:2052   CCAGCGACAAAUAAAAAGAAA   2072 Target Full Sequence	0.0	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:2548   CCAGCGACAAAUAAAAAGAAA   2568 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:2848   CCAGCGACAAAUAAAAAGAAA   2868 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:2865   CCAGCGACAAAUAAAAAGAAA   2885 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:2971   CCAGCGACAAAUAAAAAGAAA   2991 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||||||| targets:3750   CCAGCGACAAAUAAAAAGAAA   3770 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:56   UCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
HI408945.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:56   UCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
JB170422.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:56   UCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:56   UCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
HI409961.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:56   UCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
JB169406.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:56   UCAGCGACAAAUAAAAAGAAA   76 Target Full Sequence	0.0	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
EU964901.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:549   UCAGCGACAAAUAAAAAGAAA   569 Target Full Sequence	0.0	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
EU974849.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:621   UCAGCGACAAAUAAAAAGAAA   641 Target Full Sequence	0.0	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||||||| targets:621   UCAGCGACAAAUAAAAAGAAA   641 Target Full Sequence	0.0	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
BT043433.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   **||||||||||||||||||| targets:1397   GAAGCGACAAAUAAAAAGAAA   1417 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds	NA	coding protein	psRNATarget
BT088136.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   **||||||||||||||||||| targets:806   ACAGCGACAAAUAAAAAGAAA   826 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196908.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   **||||||||||||||||||| targets:806   ACAGCGACAAAUAAAAAGAAA   826 Target Full Sequence	0.0	Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA	NA	coding protein	psRNATarget
JB169171.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||||||||||*|||| targets:56   UUAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
JB170160.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||=|||||||||| targets:56   CCAGCGACAAGUAAAAAGAAA   76 Target Full Sequence	1.5	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||||||||||*|||| targets:56   UUAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||||||||||*|||| targets:56   UUAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
HI408710.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||||||||||*|||| targets:56   UUAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||=|||||||||| targets:56   CCAGCGACAAGUAAAAAGAAA   76 Target Full Sequence	1.5	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
HI409699.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||=|||||||||| targets:56   CCAGCGACAAGUAAAAAGAAA   76 Target Full Sequence	1.5	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
HI410196.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||||||||||*|||| targets:56   UUAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
JB170657.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||||||||||*|||| targets:56   UUAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
BT024153.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =|||||||*|||||||||||| targets:233   UUAGCGACUAAUAAAAAGAAA   253 Target Full Sequence	1.5	Zea mays clone EL01N0438E01 mRNA sequence	NA	coding protein	psRNATarget
AY105669.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |||||*||||||||||||||* targets:14   CUAGCAACAAAUAAAAAGAAU   34 Target Full Sequence	2.0	Zea mays PCO148095 mRNA sequence	NA	coding protein	psRNATarget
BT024069.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |||||*||||||||||||||* targets:1252   CUAGCAACAAAUAAAAAGAAU   1272 Target Full Sequence	2.0	Zea mays clone EL01N0450D06 mRNA sequence	NA	coding protein	psRNATarget
HI408570.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   **||||||||||||||||||* targets:56   NCAGCGACAAAUAAAAAGAAC   76 Target Full Sequence	1.0	Sequence 6695 from Patent EP2074227	NA	coding protein	psRNATarget
JB169031.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   **||||||||||||||||||* targets:56   NCAGCGACAAAUAAAAAGAAC   76 Target Full Sequence	1.0	Sequence 6695 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240700.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   **||||||||||||||||||* targets:56   NCAGCGACAAAUAAAAAGAAC   76 Target Full Sequence	1.0	Sequence 6695 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235469.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:41   CCAGCGACUAAUAAAAAGAAA   61 Target Full Sequence	1.5	Sequence 1464 from Patent EP2985353	NA	coding protein	psRNATarget
JB163800.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:41   CCAGCGACUAAUAAAAAGAAA   61 Target Full Sequence	1.5	Sequence 1464 from Patent EP2559767	NA	coding protein	psRNATarget
HI403339.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:41   CCAGCGACUAAUAAAAAGAAA   61 Target Full Sequence	1.5	Sequence 1464 from Patent EP2074227	NA	coding protein	psRNATarget
JB163533.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:45   CCAGCGACAACUAAAAAGAAA   65 Target Full Sequence	1.5	Sequence 1197 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235202.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:45   CCAGCGACAACUAAAAAGAAA   65 Target Full Sequence	1.5	Sequence 1197 from Patent EP2985353	NA	coding protein	psRNATarget
HI403072.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:45   CCAGCGACAACUAAAAAGAAA   65 Target Full Sequence	1.5	Sequence 1197 from Patent EP2074227	NA	coding protein	psRNATarget
JB163835.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1499 from Patent EP2559767	NA	coding protein	psRNATarget
HI403374.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1499 from Patent EP2074227	NA	coding protein	psRNATarget
HI403367.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1492 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235497.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1492 from Patent EP2985353	NA	coding protein	psRNATarget
JB163828.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1492 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235443.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1438 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235504.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1499 from Patent EP2985353	NA	coding protein	psRNATarget
JB163774.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1438 from Patent EP2559767	NA	coding protein	psRNATarget
HI403313.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:47   CCAGCGACUAAUAAAAAGAAA   67 Target Full Sequence	1.5	Sequence 1438 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241681.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:48   CCAGCGACAACUAAAAAGAAA   68 Target Full Sequence	1.5	Sequence 7676 from Patent EP2985353	NA	coding protein	psRNATarget
JB170012.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:48   CCAGCGACAACUAAAAAGAAA   68 Target Full Sequence	1.5	Sequence 7676 from Patent EP2559767	NA	coding protein	psRNATarget
HI409551.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:48   CCAGCGACAACUAAAAAGAAA   68 Target Full Sequence	1.5	Sequence 7676 from Patent EP2074227	NA	coding protein	psRNATarget
JB166303.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:49   CCAGCGACUAAUAAAAAGAAA   69 Target Full Sequence	1.5	Sequence 3967 from Patent EP2559767	NA	coding protein	psRNATarget
HI405842.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:49   CCAGCGACUAAUAAAAAGAAA   69 Target Full Sequence	1.5	Sequence 3967 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237972.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:49   CCAGCGACUAAUAAAAAGAAA   69 Target Full Sequence	1.5	Sequence 3967 from Patent EP2985353	NA	coding protein	psRNATarget
HI405824.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:52   CCAGCGACUAAUAAAAAGAAA   72 Target Full Sequence	1.5	Sequence 3949 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237954.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:52   CCAGCGACUAAUAAAAAGAAA   72 Target Full Sequence	1.5	Sequence 3949 from Patent EP2985353	NA	coding protein	psRNATarget
JB166285.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:52   CCAGCGACUAAUAAAAAGAAA   72 Target Full Sequence	1.5	Sequence 3949 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235495.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:59   CCAGCGACUAAUAAAAAGAAA   79 Target Full Sequence	1.5	Sequence 1490 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235495.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||*|||||||||||| targets:33   UCAGCGACUAAUAAAAAGAAA   53 Target Full Sequence	1.5	Sequence 1490 from Patent EP2985353	NA	coding protein	psRNATarget
JB163826.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:59   CCAGCGACUAAUAAAAAGAAA   79 Target Full Sequence	1.5	Sequence 1490 from Patent EP2559767	NA	coding protein	psRNATarget
JB163826.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||*|||||||||||| targets:33   UCAGCGACUAAUAAAAAGAAA   53 Target Full Sequence	1.5	Sequence 1490 from Patent EP2559767	NA	coding protein	psRNATarget
HI403365.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:59   CCAGCGACUAAUAAAAAGAAA   79 Target Full Sequence	1.5	Sequence 1490 from Patent EP2074227	NA	coding protein	psRNATarget
HI403365.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||*|||||||||||| targets:33   UCAGCGACUAAUAAAAAGAAA   53 Target Full Sequence	1.5	Sequence 1490 from Patent EP2074227	NA	coding protein	psRNATarget
JB169695.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:55   CCAGCGACAACUAAAAAGAAA   75 Target Full Sequence	1.5	Sequence 7359 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241364.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:55   CCAGCGACAACUAAAAAGAAA   75 Target Full Sequence	1.5	Sequence 7359 from Patent EP2985353	NA	coding protein	psRNATarget
HI409234.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:55   CCAGCGACAACUAAAAAGAAA   75 Target Full Sequence	1.5	Sequence 7359 from Patent EP2074227	NA	coding protein	psRNATarget
JB167785.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:58   CCAGCGACAACUAAAAAGAAA   78 Target Full Sequence	1.5	Sequence 5449 from Patent EP2559767	NA	coding protein	psRNATarget
HI407324.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:58   CCAGCGACAACUAAAAAGAAA   78 Target Full Sequence	1.5	Sequence 5449 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239454.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:58   CCAGCGACAACUAAAAAGAAA   78 Target Full Sequence	1.5	Sequence 5449 from Patent EP2985353	NA	coding protein	psRNATarget
HI403369.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*|*||||||||||||||||| targets:63   CCAACGACAAAUAAAAAGAAA   83 Target Full Sequence	1.0	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
JB163830.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*|*||||||||||||||||| targets:63   CCAACGACAAAUAAAAAGAAA   83 Target Full Sequence	1.0	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*|*||||||||||||||||| targets:63   CCAACGACAAAUAAAAAGAAA   83 Target Full Sequence	1.0	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
EZ089411.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:359   CCAGCGACAACUAAAAAGAAA   379 Target Full Sequence	1.5	TSA: Zea mays contig25057, mRNA sequence	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:145   CCAGCGACUAAUAAAAAGAAA   165 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT062468.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:623   CCAGCGACAACUAAAAAGAAA   643 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001328133.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:816   CCAGCGACUAAUAAAAAGAAA   836 Target Full Sequence	1.5	Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA	NA	coding protein	psRNATarget
BT070166.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:816   CCAGCGACUAAUAAAAAGAAA   836 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds	NA	coding protein	psRNATarget
BT055583.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:887   CGAGCGACAACUAAAAAGAAA   907 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153043.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:887   CGAGCGACAACUAAAAAGAAA   907 Target Full Sequence	1.5	Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA	NA	coding protein	psRNATarget
XM_008675381.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:1267   CCAGCGACUAAUAAAAAGAAA   1287 Target Full Sequence	1.5	PREDICTED: Zea mays probable WRKY transcription factor 48 (LOC103649650), mRNA	NA	coding protein	psRNATarget
EU971616.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:1214   CCAGCGACAACUAAAAAGAAA   1234 Target Full Sequence	1.5	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
EU970288.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:1375   CCAGCGACUAAUAAAAAGAAA   1395 Target Full Sequence	1.5	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:1567   CCAGCGACAACUAAAAAGAAA   1587 Target Full Sequence	1.5	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
EU964807.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:1567   CCAGCGACAACUAAAAAGAAA   1587 Target Full Sequence	1.5	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:1203   CCAGCGACAACUAAAAAGAAA   1223 Target Full Sequence	1.5	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:1652   CCAGCGACUAAUAAAAAGAAA   1672 Target Full Sequence	1.5	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008656936.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:216   CCAGCGACUAAUAAAAAGAAA   236 Target Full Sequence	1.5	PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:1860   CCAGCGACUAAUAAAAAGAAA   1880 Target Full Sequence	1.5	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:2027   CCAGCGACUAAUAAAAAGAAA   2047 Target Full Sequence	1.5	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:2094   CCAGCGACUAAUAAAAAGAAA   2114 Target Full Sequence	1.5	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020551485.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||*|||||||||| targets:2580   CCAGCGACAACUAAAAAGAAA   2600 Target Full Sequence	1.5	PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*|*||||||||||||||||| targets:2487   CCAACGACAAAUAAAAAGAAA   2507 Target Full Sequence	1.0	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008679695.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||*|||| targets:309   CCAGCGACAAAUAAAACGAAA   329 Target Full Sequence	1.5	PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020552423.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||||||||||*|||| targets:308   CCAGCGACAAAUAAAACGAAA   328 Target Full Sequence	1.5	PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||||||*|||||||||||| targets:165   CCAGCGACUAAUAAAAAGAAA   185 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB169789.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||*|||| targets:56   UCAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 7453 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241458.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||*|||| targets:56   UCAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 7453 from Patent EP2985353	NA	coding protein	psRNATarget
HI409328.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||||||||*|||| targets:56   UCAGCGACAAAUAAAACGAAA   76 Target Full Sequence	1.5	Sequence 7453 from Patent EP2074227	NA	coding protein	psRNATarget
JB167691.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||*|||||||||| targets:58   UCAGCGACAACUAAAAAGAAA   78 Target Full Sequence	1.5	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
HI407230.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||*|||||||||| targets:58   UCAGCGACAACUAAAAAGAAA   78 Target Full Sequence	1.5	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||*|||||||||| targets:58   UCAGCGACAACUAAAAAGAAA   78 Target Full Sequence	1.5	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008656230.2	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =*||||||||*|||||||||| targets:39   UCAGCGACAACUAAAAAGAAA   59 Target Full Sequence	1.5	PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA	NA	coding protein	psRNATarget
EZ113524.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   ||*|=*||||||||||||||| targets:110   CUUGUAACAAAUAAAAAGAAA   130 Target Full Sequence	3.0	TSA: Zea mays contig49185, mRNA sequence	NA	coding protein	psRNATarget
EU975435.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =||||*|||||||||||*||| targets:945   UUAGCUACAAAUAAAAAAAAA   965 Target Full Sequence	2.5	Zea mays clone 490389 tankyrase 1 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158954.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   =||||*|||||||||||*||| targets:945   UUAGCUACAAAUAAAAAAAAA   965 Target Full Sequence	2.5	Zea mays uncharacterized LOC100286066 (cl14031_1), mRNA	NA	coding protein	psRNATarget
BT037092.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||=|||*|||||||||||| targets:1136   CCAGUGACUAAUAAAAAGAAA   1156 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:21   GAUCGCUGUUUAUUUUUCUUU   1   |*||=|||*|||||||||||| targets:1136   CCAGUGACUAAUAAAAAGAAA   1156 Target Full Sequence	2.5	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget