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BaseInfo

ncRNA ID osa-miRf10362-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GCUGGAGGAUGCGACGGUGCU - NA
Stem-loop(if miRNA)   CG  U     AA   A    A      CCG     U       UAG
GC  GC AGUAC  UCG AUCC CUAGCA   AGGCU GGGUCAC   A
||  || |||||  ||| |||| ||||||   ||||| |||||||
CG  UG UCGUG  AGC UAGG GGUCGU   UCCGA CCCGGUG   U
  AG  U     GC   G    A      UAA     U       CCC
Stem-loop sequence GCCGGCUAGUACAAUCGAAUCCACUAGCACCGAGGCUUGGGUCACUAGAUCCCGUGGCCCUAGCCUAAUUGCUGGAGGAUGCGACGGUGCUUGUGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107995.1
ncRNA:21   UCGUGGCAGCGUAGGAGGUCG   1
  ||==|||*|||||||||||||
targets:69   AGUGCCGCCGCAUCCUCCAGC   89

3.0 Oryza sativa Japonica Group cDNA clone:002-135-F12, full insert sequence NA coding protein psRNATarget
AK288734.1
ncRNA:21   UCGUGGCAGCGUAGGAGGUCG   1
  *||=|||||||*|||||||||
targets:2654   CGCGCCGUCGCCUCCUCCAGC   2674

2.5 Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence NA coding protein psRNATarget
AK240804.1
ncRNA:21   UCGUGGCAGCGUAGGAGGUCG   1
  *||=|||||||*|||||||||
targets:123   CGCGCCGUCGCCUCCUCCAGC   143

2.5 Oryza sativa Japonica Group cDNA, clone: J065005K15, full insert sequence NA coding protein psRNATarget
XM_015785192.1
ncRNA:21   UCGUGGCAGCGUAGGAGGUCG   1
  *||||||*|||*|||||||||
targets:2192   CGCACCGCCGCCUCCUCCAGC   2212

2.5 PREDICTED: Oryza sativa Japonica Group protein FAR1-RELATED SEQUENCE 5-like (LOC107281147), transcript variant X2, mRNA protein FAR1-RELATED SEQUENCE 5-like(LOC107281147) coding protein psRNATarget