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BaseInfo

ncRNA ID	novel_zma_miR7643
Species	Zea mays
Class	miRNA
Genome position	Chr1:32605440-32605563 [-]
Reference genome	RefGen_v4
Source	SRR3341856
Length	21
Mature sequence(if miRNA)	104 - UUGUUUGGGAACAAGGAUACU - 124
Stem-loop(if miRNA)	--          A         UA              G        CCC      U    A   UUGUUUGGGA CAAGGAUAC  GAGGGGAUUGGAGG GCUAAAAU   CUUGCU UUCA A   |||||||||| |||||||||  |||||||||||||| ||||||||   |||||| ||||   AACAAACCCU GUUCUUAUG  CUUCCCUAACCUCC CGAUUUUA   GAACGA AAGU U CG          C         GC              A        AAA      U    C
Stem-loop sequence	UUGUUUGGGAACAAGGAUACUAGAGGGGAUUGGAGGGGCUAAAAUCCCCUUGCUUUUCAAAUCUGAAUAGCAAGAAAAUUUUAGCACCUCCAAUCCCUUCCGGUAUUCUUGCUCCCAAACAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008645953.2	ncRNA:21   UCAUAGGAACAAGGGUUUGUU   1   *|||||||||*|||||||||| targets:1736   UGUAUCCUUGCUCCCAAACAA   1756 Target Full Sequence	1.5	PREDICTED: Zea mays Actin-related protein 2/3 complex subunit 1A (LOC100384689), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645952.2	ncRNA:21   UCAUAGGAACAAGGGUUUGUU   1   *|||||||||*|||||||||| targets:1703   UGUAUCCUUGCUCCCAAACAA   1723 Target Full Sequence	1.5	PREDICTED: Zea mays Actin-related protein 2/3 complex subunit 1A (LOC100384689), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU963543.1	ncRNA:21   UCAUAGGAACAAGGGUUUGUU   1   *|||||||||*|||||||||| targets:1436   UGUAUCCUUGCUCCCAAACAA   1456 Target Full Sequence	1.5	Zea mays clone 263925 mRNA sequence	NA	coding protein	psRNATarget
XM_008675165.2	ncRNA:21   UCAUAGGAACAAGGGUUUGUU   1   |*|*||||||*|||||||||| targets:2793   AAUCUCCUUGCUCCCAAACAA   2813 Target Full Sequence	2.5	PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA	NA	coding protein	psRNATarget