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BaseInfo

ncRNA ID osa-miRf10360-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GGCUUAAGACGGCCACCAGC - NA
Stem-loop(if miRNA) U   UA   A              A          A    U
 UUU  CUG UGGUCGUCUUAAGC AGCCGUCAGC AAAA C
 |||  ||| |||||||||||||| |||||||||| ||||
 AAA  GAC ACCGGCAGAAUUCG UUGGCGGUCG UUUU U
A   GC   C              G          C    A
Stem-loop sequence UUUUUACUGAUGGUCGUCUUAAGCAAGCCGUCAGCAAAAAUCUAUUUUCGCUGGCGGUUGGCUUAAGACGGCCACCAGCGAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404153.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  |||||*||||||||||||||
targets:15   GCUGGCGGCCGUCUUAAGCC   34

1.0 Sequence 2278 from Patent EP2074227 NA coding protein psRNATarget
JB164614.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  |||||*||||||||||||||
targets:15   GCUGGCGGCCGUCUUAAGCC   34

1.0 Sequence 2278 from Patent EP2559767 NA coding protein psRNATarget
LQ236283.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  |||||*||||||||||||||
targets:15   GCUGGCGGCCGUCUUAAGCC   34

1.0 Sequence 2278 from Patent EP2985353 NA coding protein psRNATarget
AK103787.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  |||*|||||||*||||||||
targets:414   GCUUGUGGCCGCCUUAAGCC   433

2.5 Oryza sativa Japonica Group cDNA clone:J033145I17, full insert sequence NA coding protein psRNATarget
HI404291.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  *||||*||||||||||||*|
targets:15   ACUGGAGGCCGUCUUAAGGC   34

2.5 Sequence 2416 from Patent EP2074227 NA coding protein psRNATarget
JB164752.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  *||||*||||||||||||*|
targets:15   ACUGGAGGCCGUCUUAAGGC   34

2.5 Sequence 2416 from Patent EP2559767 NA coding protein psRNATarget
LQ236421.1
ncRNA:20   CGACCACCGGCAGAAUUCGG   1
  *||||*||||||||||||*|
targets:15   ACUGGAGGCCGUCUUAAGGC   34

2.5 Sequence 2416 from Patent EP2985353 NA coding protein psRNATarget