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BaseInfo

ncRNA ID	novel_zma_miR7615
Species	Zea mays
Class	miRNA
Genome position	Chr5:215080404-215080546 [+]
Reference genome	RefGen_v4
Source	SRR3341856
Length	20
Mature sequence(if miRNA)	1 - UUAAAUCUGGUGCAUUCAUU - 20
Stem-loop(if miRNA)	--UU                   C C  C    A   G  - C            C    C       UUCC     AAAUCUGGUGCAUUCAUUU G AU UAAC GCA CA C AAUUUUAUGAAG ACCC UUCCACC    U     ||||||||||||||||||| | || |||| ||| || | |||||||||||| |||| |||||||     UUUAGACCACGUAGGUAGA C UA AUUG CGU GU G UUAAAAUGCUUC UGGG AGGGUGG    C AAAU                   A A  A    C   G  C A            U    A       UCCC
Stem-loop sequence	UUAAAUCUGGUGCAUUCAUUUCGCAUCUAACAGCAGCACCAAUUUUAUGAAGCACCCCUUCCACCUUCCUCCCCUGGUGGGAAGGGUUCUUCGUAAAAUUAGCUGGUGCCGUUAAAUACAAGAUGGAUGCACCAGAUUUUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020551532.1	ncRNA:20   UUACUUACGUGGUCUAAAUU   1   |||||||||||||||||||| targets:771   AAUGAAUGCACCAGAUUUAA   790 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100282291 (pco125364), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008645476.2	ncRNA:20   UUACUUACGUGGUCUAAAUU   1   |||||||||||||||||||| targets:895   AAUGAAUGCACCAGAUUUAA   914 Target Full Sequence	0.0	PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235558.1	ncRNA:20   UUACUUACGUGGUCUAAAUU   1   =|||=||*|||||||||||| targets:131   GAUGGAUACACCAGAUUUAA   150 Target Full Sequence	2.5	Sequence 1553 from Patent EP2985353	NA	coding protein	psRNATarget
JB163889.1	ncRNA:20   UUACUUACGUGGUCUAAAUU   1   =|||=||*|||||||||||| targets:131   GAUGGAUACACCAGAUUUAA   150 Target Full Sequence	2.5	Sequence 1553 from Patent EP2559767	NA	coding protein	psRNATarget
HI403428.1	ncRNA:20   UUACUUACGUGGUCUAAAUU   1   =|||=||*|||||||||||| targets:131   GAUGGAUACACCAGAUUUAA   150 Target Full Sequence	2.5	Sequence 1553 from Patent EP2074227	NA	coding protein	psRNATarget