ncRNA ID | novel_zma_miR7580 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:133857807-133857918 [+] |
Reference genome | RefGen_v4 |
Source | SRR3341856 |
Length | 21 |
Mature sequence(if miRNA) | 92 - AACAAAUUGGUUGGGCUGCGG - 112 |
Stem-loop(if miRNA) |
--  U                           A         CUUU    U   - AA   GC GUCCAAUCGAUUUGUUGGUUUUAACUG CUUUGUCAC    UUAG UUG C  A   || ||||||||||||||||||||||||||| |||||||||    |||| ||| |  A   CG CGGGUUGGUUAAACAACCAAAAUUGAC GAAACAGUG    AAUC AAC G  A GG  U                           C         ----    U   A GU |
Stem-loop sequence | GCUGUCCAAUCGAUUUGUUGGUUUUAACUGACUUUGUCACCUUUUUAGUUUGCAAAAAUGGACAAUCUAAGUGACAAAGCCAGUUAAAACCAACAAAUUGGUUGGGCUGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ048887.1 |
|
2.0 | TSA: Zea mays contig50005, mRNA sequence | NA | coding protein | psRNATarget |