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BaseInfo

ncRNA ID novel_zma_miR7578
Species Zea mays
Class miRNA
Genome position Chr3:79228900-79228950 [+]
Reference genome RefGen_v4
Source SRR3341856;SRR2089699;SRR2089702
Length 21
Mature sequence(if miRNA) 31 - AGAUUGAACUAGUACUCCUGA - 51
Stem-loop(if miRNA) --            G          
  AGGGGUACUAGU CAAUCUCCUAG
  |||||||||||| ||||||||||C
  UCCUCAUGAUCA GUUAGAGGAUC
AG            A          
Stem-loop sequence AGGGGUACUAGUGCAAUCUCCUAGCCUAGGAGAUUGAACUAGUACUCCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008662311.2
ncRNA:21   AGUCCUCAUGAUCAAGUUAGA   1
  *||||=*|||||||||||||*
targets:1190   CCAGGGCUACUAGUUCAAUCA   1210

3.0 PREDICTED: Zea mays EPIDERMAL PATTERNING FACTOR-like protein 4 (LOC103639579), mRNA NA coding protein psRNATarget