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BaseInfo

ncRNA ID novel_zma_miR7577
Species Zea mays
Class miRNA
Genome position Chr3:4835729-4835812 [+]
Reference genome RefGen_v4
Source SRR3341856
Length 21
Mature sequence(if miRNA) 64 - UUUUCUGGCUGCCAAACUAGC - 84
Stem-loop(if miRNA) --      A  -                 A         AGCU
  UAGUUU GG AGCCAGAAAAUCGGAGG GAUUGAAGG    A
  |||||| || ||||||||||||||||| |||||||||
  AUCAAA CC UCGGUCUUUUGGCCUCC CUAGCUUCC    A
CG      -  G                 C         CCCA
Stem-loop sequence UAGUUUAGGAGCCAGAAAAUCGGAGGAGAUUGAAGGAGCUAAACCCCCUUCGAUCCCCUCCGGUUUUCUGGCUGCCAAACUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ074100.1
ncRNA:21   CGAUCAAACCGUCGGUCUUUU   1
  ||||||||||*||||||||||
targets:135   GCUAGUUUGGGAGCCAGAAAA   155

1.5 TSA: Zea mays contig09737, mRNA sequence NA coding protein psRNATarget