ncRNA ID | novel_zma_miR7560 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:27666633-27666764 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647467 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCUCCAACAGAUCUCUUAAAGCAG - 24 |
Stem-loop(if miRNA) |
--          A         -  A  AGA UG   -GUGGGG     --    AC           A   UCUCCAACAG UCUCUUAAA GC GC   U  AUU       AGCCC  AAAA  CCCUCAUUUGU G   |||||||||| ||||||||| || ||   |  |||       |||||  ||||  |||||||||||   AGAGGUUGUC AGGGGAUUU CG CG   G  UGA       UCGGG  UUUU  GGGAGUAAACA C AC          A         U  -  -AG GU   AAAAGUA     AA    CA           U |
Stem-loop sequence | UCUCCAACAGAUCUCUUAAAGCAGCAGAUUGAUUGUGGGGAGCCCAAAAACCCCUCAUUUGUAGCUACAAAUGAGGGACUUUUAAGGGCUAUGAAAAAGUUGGGAGCGCUUUUAGGGGAACUGUUGGAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ050474.1 |
|
1.0 | TSA: Zea mays contig51594, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT066766.1 |
|
1.0 | Zea mays full-length cDNA clone ZM_BFb0066D22 mRNA, complete cds | NA | coding protein | psRNATarget |