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BaseInfo

ncRNA ID	novel_zma_miR7559
Species	Zea mays
Class	miRNA
Genome position	Chr4:2558484-2558583 [+]
Reference genome	RefGen_v4
Source	SRR2647467
Length	24
Mature sequence(if miRNA)	1 - GUCUUUGCCGAGUGCCGUUCGGUG - 24
Stem-loop(if miRNA)	--- U                --      C   GUGUUCA  U          U    G CUUUGCCGAGUGCCGU  UCGGUG CGA       GC CUCGGCAAAG U    | ||||||||||||||||  |||||| |||       || ||||||||||    C GAAACGGCUCACGGCG  AGCCAU GCU       CG GAGCCGUUUC G UUU -                UG      U   ----AUC  U          U
Stem-loop sequence	GUCUUUGCCGAGUGCCGUUCGGUGCCGAGUGUUCAGCUCUCGGCAAAGUUGUCUUUGCCGAGUGCCUAUCGUUACCGAGUGCGGCACUCGGCAAAGCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067215.1	ncRNA:24   GUGGCUUGCCGUGAGCCGUUUCUG   1   |||*|||||||||||||||||||| targets:1267   CACAGAACGGCACUCGGCAAAGAC   1290 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:24   GUGGCUUGCCGUGAGCCGUUUCUG   1   |||*|||||||||||||||||||| targets:1404   CACAGAACGGCACUCGGCAAAGAC   1427 Target Full Sequence	0.0	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
BT064046.1	ncRNA:24   GUGGCUUGCCGUGAGCCGUUUCUG   1   |||*|||||||||||||||||||| targets:1404   CACAGAACGGCACUCGGCAAAGAC   1427 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   GU-GGCUUGCCGUGAGCCGUUUCUG   1   ||-||*=||*||||||||||||||* targets:76   CAGCCUGACAGCACUCGGCAAAGAA   100 Target Full Sequence	3.0	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   GU-GGCUUGCCGUGAGCCGUUUCUG   1   ||-||*=||*||||||||||||||* targets:76   CAGCCUGACAGCACUCGGCAAAGAA   100 Target Full Sequence	3.0	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   GU-GGCUUGCCGUGAGCCGUUUCUG   1   ||-||*=||*||||||||||||||* targets:76   CAGCCUGACAGCACUCGGCAAAGAA   100 Target Full Sequence	3.0	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget