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BaseInfo

ncRNA ID novel_zma_miR7547
Species Zea mays
Class miRNA
Genome position Chr10:86415707-86415831 [+]
Reference genome RefGen_v4
Source SRR2647467
Length 24
Mature sequence(if miRNA) 1 - ACCGUCACUAGAAAUCGUAUUUCU - 24
Stem-loop(if miRNA) --                         G                         C  C     
  ACCGUCACUAGAAAUCGUAUUUCUA UGGCGGUUCCUUAAGAAAACCGCCA UA AAAUCA
  ||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||U
  UGGCGGUGAUCUUUAGCAUAAAGAU ACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGG
UU                         G                         C  C     
Stem-loop sequence ACCGUCACUAGAAAUCGUAUUUCUAGUGGCGGUUCCUUAAGAAAACCGCCACUACAAAUCAUGGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCCAGUAGAAAUACGAUUUCUAGUGGCGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403085.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2074227 NA coding protein psRNATarget
LQ235215.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2985353 NA coding protein psRNATarget
JB163546.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2559767 NA coding protein psRNATarget