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BaseInfo

ncRNA ID	novel_zma_miR7546
Species	Zea mays
Class	miRNA
Genome position	Chr3:213109048-213109135 [-]
Reference genome	RefGen_v4
Source	SRR2647467
Length	24
Mature sequence(if miRNA)	1 - AUCAAUCUCCUUCAAUCUAUAUGG - 24
Stem-loop(if miRNA)	--            A        -GG     UUAAUCUCUAGUA   AUAUGGAUUGAG GGGAUUGA   GGGUU             A   |||||||||||| ||||||||   |||||             G   UAUAUCUAACUU CUCUAACU   CCUAA             U GG            C        AUG     UACUCUAUAAAAC
Stem-loop sequence	AUAUGGAUUGAGAGGGAUUGAGGGGGUUUUAAUCUCUAGUAAGUCAAAAUAUCUCAUAAUCCGUAUCAAUCUCCUUCAAUCUAUAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU948993.1	ncRNA:24   GGUAUAUCUAACUUCCUCUAACUA   1   ||||||||||||||||=||||||| targets:528   CCAUAUAGAUUGAAGGGGAUUGAU   551 Target Full Sequence	1.5	Zea mays clone 393064 mRNA sequence	NA	coding protein	psRNATarget
XM_008680349.2	ncRNA:24   GGUAUAUCUAACUUCCUCUAACUA   1   ||||||=|||||||||=||||||| targets:1902   CCAUAUGGAUUGAAGGGGAUUGAU   1925 Target Full Sequence	2.5	PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001157563.1	ncRNA:24   GGUAUAUCUAACUUCCUCUAACUA   1   ||||=|=|||*||||||||||||* targets:1159   CCAUGUGGAUCGAAGGAGAUUGAG   1182 Target Full Sequence	3.0	Zea mays F-box domain containing protein (LOC100284668), mRNA	NA	coding protein	psRNATarget
EU969259.1	ncRNA:24   GGUAUAUCUAACUUCCUCUAACUA   1   ||||=|=|||*||||||||||||* targets:1159   CCAUGUGGAUCGAAGGAGAUUGAG   1182 Target Full Sequence	3.0	Zea mays clone 327659 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget