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BaseInfo

ncRNA ID novel_zma_miR7545
Species Zea mays
Class miRNA
Genome position Chr3:230259294-230259409 [-]
Reference genome RefGen_v4
Source SRR2647467
Length 23
Mature sequence(if miRNA) 1 - CGUAUCUAGGGAACCUGGCUCUU - 23
Stem-loop(if miRNA) --AU  UG  C     G       -         UC       --      ---      AC
    GC  GG UUCCU UGGAUGC AGUCAGGCU  CUCGGCC  ACGACU   CGGGCC  U
    ||  || ||||| ||||||| |||||||||  |||||||  ||||||   ||||||
    CG  CC AAGGG AUCUAUG UCGGUCCGG  GGGUUGG  UGUUGG   GUCUGG  A
UUCU  GU  -     -       C         GU       UC      UUU      GC
Stem-loop sequence AUGCUGGGCUUCCUGUGGAUGCAGUCAGGCUUCCUCGGCCACGACUCGGGCCACUACGGGUCUGUUUGGUUGUCUGGUUGGGUGGGCCUGGCUCGUAUCUAGGGAACCUGGCUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008663462.2
ncRNA:23   UUCUCGGUCCAAGGGAUCUAUGC   1
  |||||||||||||||||||||||
targets:2623   AAGAGCCAGGUUCCCUAGAUACG   2645

0.0 PREDICTED: Zea mays hypothetical protein (LOC100274870), transcript variant X3, mRNA NA coding protein psRNATarget