ncRNA ID | novel_zma_miR7545 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:230259294-230259409 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647467 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CGUAUCUAGGGAACCUGGCUCUU - 23 |
Stem-loop(if miRNA) |
--AU  UG  C     G       -         UC       --      ---      AC     GC  GG UUCCU UGGAUGC AGUCAGGCU  CUCGGCC  ACGACU   CGGGCC  U     ||  || ||||| ||||||| |||||||||  |||||||  ||||||   ||||||     CG  CC AAGGG AUCUAUG UCGGUCCGG  GGGUUGG  UGUUGG   GUCUGG  A UUCU  GU  -     -       C         GU       UC      UUU      GC |
Stem-loop sequence | AUGCUGGGCUUCCUGUGGAUGCAGUCAGGCUUCCUCGGCCACGACUCGGGCCACUACGGGUCUGUUUGGUUGUCUGGUUGGGUGGGCCUGGCUCGUAUCUAGGGAACCUGGCUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008663462.2 |
|
0.0 | PREDICTED: Zea mays hypothetical protein (LOC100274870), transcript variant X3, mRNA | NA | coding protein | psRNATarget |