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BaseInfo

ncRNA ID novel_zma_miR7542
Species Zea mays
Class miRNA
Genome position Chr2:15442485-15442563 [+]
Reference genome RefGen_v4
Source SRR2647467
Length 23
Mature sequence(if miRNA) 1 - CCGCCACUAGAAAUUGUAUUUCU - 23
Stem-loop(if miRNA) --                  --      G A      CCU
  CCGCCACUAGAAAUUGUA  UUUCUA A GCGGUU   U
  ||||||||||||||||||  |||||| | ||||||   A
  GGCGGUGAUCUUUAAUAU  AAAGAU U CGCCAA   U
UU                  CU      G C      AAG
Stem-loop sequence CCGCCACUAGAAAUUGUAUUUCUAGAAGCGGUUCCUUAUGAAAACCGCCUGUAGAAAUCUAUAAUUUCUAGUGGCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163473.1
ncRNA:23   UCUUUAUGUUAAAGAUCACCGCC   1
  |*|||*|==||||||||||||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2559767 NA coding protein psRNATarget
LQ235142.1
ncRNA:23   UCUUUAUGUUAAAGAUCACCGCC   1
  |*|||*|==||||||||||||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2985353 NA coding protein psRNATarget
HI403012.1
ncRNA:23   UCUUUAUGUUAAAGAUCACCGCC   1
  |*|||*|==||||||||||||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2074227 NA coding protein psRNATarget