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BaseInfo

ncRNA ID	novel_zma_miR7534
Species	Zea mays
Class	miRNA
Genome position	Chr2:12880806-12880873 [-]
Reference genome	RefGen_v4
Source	SRR2647467
Length	21
Mature sequence(if miRNA)	48 - UCAUCUCUUCUCUUUGGGCGG - 68
Stem-loop(if miRNA)	---U    U  UC        C  -GC   UACAU     CAUC CU  UCUUUGGG GG   UUA     A     |||| ||  |||||||| ||   |||     C     GUAG GA  AGAAACCC CU   AAU     C ACAC    -  UC        U  AAC   UACAU
Stem-loop sequence	UCAUCUCUUCUCUUUGGGCGGGCUUAUACAUACCUACAUUAACAAUCUCCCAAAGACUAGGAUGCACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055411.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   =*||||||=|||||||||||| targets:223   UAGCCCAAGGAGAAGAGAUGA   243 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0151B14 mRNA, complete cds	NA	coding protein	psRNATarget
EZ070816.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   *=|||||||||||*||||||* targets:88   AUGCCCAAAGAGACGAGAUGC   108 Target Full Sequence	2.5	TSA: Zea mays contig06453, mRNA sequence	NA	coding protein	psRNATarget
BT067993.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   *=|||||||||||*||||||* targets:504   AUGCCCAAAGAGACGAGAUGC   524 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0018I18 mRNA, complete cds	NA	coding protein	psRNATarget
EU949438.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   *=|||||||||||*||||||* targets:488   AUGCCCAAAGAGACGAGAUGC   508 Target Full Sequence	2.5	Zea mays clone 407761 mRNA sequence	NA	coding protein	psRNATarget
BT068210.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   *=|||||||||||*||||||* targets:514   AUGCCCAAAGAGACGAGAUGC   534 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0077B23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176389.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   *=|||||||||||*||||||* targets:514   AUGCCCAAAGAGACGAGAUGC   534 Target Full Sequence	2.5	Zea mays D-cysteine desulfhydrase 2 mitochondrial (LOC100383754), mRNA	NA	coding protein	psRNATarget
EZ051338.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   |**||||||||||*||||||| targets:110   CAUCCCAAAGAGAUGAGAUGA   130 Target Full Sequence	2.5	TSA: Zea mays contig52458, mRNA sequence	NA	coding protein	psRNATarget
EU965343.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   |**||||||||||*||||||| targets:1302   CAUCCCAAAGAGAUGAGAUGA   1322 Target Full Sequence	2.5	Zea mays clone 285434 myb-like DNA-binding domain, SHAQKYF class family protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156529.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   |**||||||||||*||||||| targets:1302   CAUCCCAAAGAGAUGAGAUGA   1322 Target Full Sequence	2.5	Zea mays myb-like DNA-binding domain, SHAQKYF class family protein (LOC100283628), mRNA	NA	coding protein	psRNATarget
BT016414.1	ncRNA:21   GGCGGGUUUCUCUUCUCUACU   1   |**||||||||||*||||||| targets:1288   CAUCCCAAAGAGAUGAGAUGA   1308 Target Full Sequence	2.5	Zea mays clone Contig247 mRNA sequence	NA	coding protein	psRNATarget