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BaseInfo

ncRNA ID novel_zma_miR7533
Species Zea mays
Class miRNA
Genome position Chr2:186501200-186501322 [-]
Reference genome RefGen_v4
Source SRR2647467
Length 23
Mature sequence(if miRNA) 101 - UCGCCACUAGAAAUCGUAUUUCU - 123
Stem-loop(if miRNA) --                        C        C             C  C  C     
  UCGCCACUAGAAAUCGUAUUUCUA UGGCGGUU CUUAAGAAAACCG CA UA AAAUCC
  |||||||||||||||||||||||| |||||||| ||||||||||||| || || |||||A
  GGCGGUGAUCUUUAGCAUAAAGAU ACUGCCAA GAAUUCUUUUGGC GU AU UUUAGU
UU                        C        A             A  C  C     
Stem-loop sequence UCGCCACUAGAAAUCGUAUUUCUACUGGCGGUUCCUUAAGAAAACCGCCACUACAAAUCCAUGAUUUCUACUGACGGUUUUCUUAAGAAACCGUCACUAGAAAUACGAUUUCUAGUGGCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163473.1
ncRNA:23   UCUUUAUGCUAAAGAUCACCGCU   1
  |*|||*|=||||||||||||||=
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2559767 NA coding protein psRNATarget
LQ235142.1
ncRNA:23   UCUUUAUGCUAAAGAUCACCGCU   1
  |*|||*|=||||||||||||||=
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2985353 NA coding protein psRNATarget
HI403012.1
ncRNA:23   UCUUUAUGCUAAAGAUCACCGCU   1
  |*|||*|=||||||||||||||=
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2074227 NA coding protein psRNATarget