Search result

BaseInfo

ncRNA ID	osa-miRf10350-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UGCUCACCACGGCUUGCUUC - NA
Stem-loop(if miRNA)	U    G    G A          GA   G  UAA  A AGGCGG GGAG AGGU G GGUGGGCGGA  CGG GU   GU C |||||| |||| |||| | ||||||||||  ||| ||   || G UUUGCC CUUC UUCG C CCACUCGUUU  GCU CA   CG C       -    G    G A          -G   G  CGG  G
Stem-loop sequence	AGGCGGUGGAGGAGGUGGAGGUGGGCGGAGACGGGGUUAAGUACGCGGCGGCACGUCGGUUUGCUCACCACGGCUUGCUUCCCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015795672.1	ncRNA:20   CUUCGUUCGGCACCACUCGU   1   ||*||||||||*|||||||| targets:986   GAUGCAAGCCGCGGUGAGCA   1005 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic (LOC4347022), mRNA	dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic(LOC4347022)	coding protein	psRNATarget
AK060606.1	ncRNA:20   CUUCGUUCGGCACCACUCGU   1   ||*||||||||*|||||||| targets:928   GAUGCAAGCCGCGGUGAGCA   947 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-025-B10, full insert sequence	NA	coding protein	psRNATarget
XM_015760085.1	ncRNA:20   CUUCGUUCGGCACCACUCGU   1   **||||||||*||||||||| targets:131   CUAGCAAGCCAUGGUGAGCA   150 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cell division cycle-associated protein 7 (LOC4350744), mRNA	cell division cycle-associated protein 7(LOC4350744)	coding protein	psRNATarget
AK064398.1	ncRNA:20   CUUCGUUCGGCACCACUCGU   1   **||||||||*||||||||| targets:127   CUAGCAAGCCAUGGUGAGCA   146 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-108-G10, full insert sequence	NA	coding protein	psRNATarget
AK103282.1	ncRNA:20   CUUCGUUCGGCACCACUCGU   1   **||||||||*||||||||| targets:133   CUAGCAAGCCAUGGUGAGCA   152 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033124M10, full insert sequence	NA	coding protein	psRNATarget