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BaseInfo

ncRNA ID novel_zma_miR7529
Species Zea mays
Class miRNA
Genome position Chr2:41434562-41434643 [+]
Reference genome RefGen_v4
Source SRR1745812
Length 21
Mature sequence(if miRNA) 1 - UUCCCUCCGUUUCUUUUUAUU - 21
Stem-loop(if miRNA) --     U                                A
  UUCCC CCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCA A
  ||||| ||||||||||||||||||||||||||||||||
  GAGGG GGCAAAGAAAAAUAAUCAGCGACCUAUCACGU A
AU     U                                U
Stem-loop sequence UUCCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAAAUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGUGGGAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI405830.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:61   AAUAAAAAGAAACGGAGGGAG   81

1.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
LQ237960.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:61   AAUAAAAAGAAACGGAGGGAG   81

1.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
JB166291.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:61   AAUAAAAAGAAACGGAGGGAG   81

1.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
LQ240748.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
JB170476.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
LQ242145.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
LQ242091.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI410015.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB169079.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:65   AAUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ240753.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:70   AAUAAAAAGAAACGGAGGGAG   90

1.0 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
JB169084.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:70   AAUAAAAAGAAACGGAGGGAG   90

1.0 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
HI408623.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:70   AAUAAAAAGAAACGGAGGGAG   90

1.0 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
EZ067019.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:8   AAUAAAAAGAAACGGAGGGAG   28

1.0 TSA: Zea mays contig02653, mRNA sequence NA coding protein psRNATarget
EU964901.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:558   AAUAAAAAGAAACGGAGGGAG   578

1.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
XM_008664463.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:154   AAUAAAAAGAAACGGAGGGAG   174

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
EU973473.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:710   AAUAAAAAGAAACGGAGGGAG   730

1.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
EU974849.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:630   AAUAAAAAGAAACGGAGGGAG   650

1.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:630   AAUAAAAAGAAACGGAGGGAG   650

1.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:291   AAUAAAAAGAAACGGAGGGAG   311

1.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT037092.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1145   AAUAAAAAGAAACGGAGGGAG   1165

1.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1145   AAUAAAAAGAAACGGAGGGAG   1165

1.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1227   AAUAAAAAGAAACGGAGGGAG   1247

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1349   AAUAAAAAGAAACGGAGGGAG   1369

1.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1349   AAUAAAAAGAAACGGAGGGAG   1369

1.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:202   AAUAAAAAGAAACGGAGGGAG   222

1.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1416   AAUAAAAAGAAACGGAGGGAG   1436

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1333   AAUAAAAAGAAACGGAGGGAG   1353

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1384   AAUAAAAAGAAACGGAGGGAG   1404

1.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
BT043433.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1406   AAUAAAAAGAAACGGAGGGAG   1426

1.0 Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds NA coding protein psRNATarget
XM_008677073.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1588   AAUAAAAAGAAACGGAGGGAG   1608

1.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1604   AAUAAAAAGAAACGGAGGGAG   1624

1.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1661   AAUAAAAAGAAACGGAGGGAG   1681

1.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1869   AAUAAAAAGAAACGGAGGGAG   1889

1.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2061   AAUAAAAAGAAACGGAGGGAG   2081

1.0 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_020542418.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2036   AAUAAAAAGAAACGGAGGGAG   2056

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2103   AAUAAAAAGAAACGGAGGGAG   2123

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2557   AAUAAAAAGAAACGGAGGGAG   2577

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2496   AAUAAAAAGAAACGGAGGGAG   2516

1.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:1524   AAUAAAAAGAAACGGAGGGAG   1544

1.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2857   AAUAAAAAGAAACGGAGGGAG   2877

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2874   AAUAAAAAGAAACGGAGGGAG   2894

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:2980   AAUAAAAAGAAACGGAGGGAG   3000

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664460.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:174   AAUAAAAAGAAACGGAGGGAG   194

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:3202   AAUAAAAAGAAACGGAGGGAG   3222

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:3211   AAUAAAAAGAAACGGAGGGAG   3231

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||||||=
targets:3759   AAUAAAAAGAAACGGAGGGAG   3779

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
JB170160.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |=||||||||||||||||||=
targets:65   AGUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |=||||||||||||||||||=
targets:65   AGUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI409699.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |=||||||||||||||||||=
targets:65   AGUAAAAAGAAACGGAGGGAG   85

1.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
HI403279.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||=|||||||=
targets:72   AAUAAAAAGAAAUGGAGGGAG   92

2.5 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
JB163740.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||=|||||||=
targets:72   AAUAAAAAGAAAUGGAGGGAG   92

2.5 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
LQ235409.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||=|||||||=
targets:72   AAUAAAAAGAAAUGGAGGGAG   92

2.5 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
HI407230.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:66   AACUAAAAAGAAACGGAGGGAG   87

3.0 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
LQ239360.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:66   AACUAAAAAGAAACGGAGGGAG   87

3.0 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
JB167691.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:66   AACUAAAAAGAAACGGAGGGAG   87

3.0 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
BT062468.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:631   AACUAAAAAGAAACGGAGGGAG   652

3.0 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
XM_008656230.2
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:47   AACUAAAAAGAAACGGAGGGAG   68

3.0 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:1222   AACUAAAAAGAAACGGAGGGAG   1243

3.0 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:1575   AACUAAAAAGAAACGGAGGGAG   1596

3.0 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:1575   AACUAAAAAGAAACGGAGGGAG   1596

3.0 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:1211   AACUAAAAAGAAACGGAGGGAG   1232

3.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-||||||||||||||||||=
targets:2588   AACUAAAAAGAAACGGAGGGAG   2609

3.0 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
HI405828.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||*|||||||||||=
targets:61   AAUAAAAAAAAACGGAGGGAG   81

2.5 Sequence 3953 from Patent EP2074227 NA coding protein psRNATarget
JB166289.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||*|||||||||||=
targets:61   AAUAAAAAAAAACGGAGGGAG   81

2.5 Sequence 3953 from Patent EP2559767 NA coding protein psRNATarget
LQ237958.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||*|||||||||||=
targets:61   AAUAAAAAAAAACGGAGGGAG   81

2.5 Sequence 3953 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
HI408570.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||*||||||||=
targets:65   AAUAAAAAGAACCGGAGGGAG   85

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
HI409616.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||*|||||||=
targets:65   AAUAAAAAGAAAGGGAGGGAG   85

2.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
HI409328.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||*|||||||=
targets:65   AAUAAAAAGAAAGGGAGGGAG   85

2.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
LQ240700.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||*||||||||=
targets:65   AAUAAAAAGAACCGGAGGGAG   85

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
LQ242326.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||*||||||||=
targets:65   AAUAAAAAGAACCGGAGGGAG   85

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB169789.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
HI410196.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||*||||||||||||=
targets:65   AAUAAAACGAAACGGAGGGAG   85

2.0 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170077.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||*|||||||=
targets:65   AAUAAAAAGAAAGGGAGGGAG   85

2.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
LQ237990.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||*|||||||||||=
targets:66   AAUAAAAAAAAACGGAGGGAG   86

2.5 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
JB166321.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||*|||||||||||=
targets:66   AAUAAAAAAAAACGGAGGGAG   86

2.5 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
HI405860.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||*|||||||||||=
targets:66   AAUAAAAAAAAACGGAGGGAG   86

2.5 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
HI403369.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:72   AAUAAAAAGAAACGGAGAGAG   92

2.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
LQ235499.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:72   AAUAAAAAGAAACGGAGAGAG   92

2.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
JB163862.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:72   AAUAAAAAGAAACGGAGAGAG   92

2.5 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
JB163830.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:72   AAUAAAAAGAAACGGAGAGAG   92

2.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
HI403401.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:72   AAUAAAAAGAAACGGAGAGAG   92

2.5 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
LQ235531.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:72   AAUAAAAAGAAACGGAGAGAG   92

2.5 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
EZ061437.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:229   AAUAAAAAGAAACGGAGAGAG   249

2.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
NM_001328133.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:825   AAUAAAAAGAAACGGAGAGAG   845

2.5 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
BT070166.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:825   AAUAAAAAGAAACGGAGAGAG   845

2.5 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
XM_008675381.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||*|||||=
targets:1276   AAUAAAAAGAAACGAAGGGAG   1296

2.5 PREDICTED: Zea mays probable WRKY transcription factor 48 (LOC103649650), mRNA NA coding protein psRNATarget
LQ239435.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  **||||||||||||||||||=
targets:67   UCUAAAAAGAAACGGAGGGAG   87

1.0 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
JB167766.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  **||||||||||||||||||=
targets:67   UCUAAAAAGAAACGGAGGGAG   87

1.0 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407305.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  **||||||||||||||||||=
targets:67   UCUAAAAAGAAACGGAGGGAG   87

1.0 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
BT088136.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||*|||=
targets:815   AAUAAAAAGAAACGGAAGGAG   835

2.5 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001196908.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||||||||||||||||*|||=
targets:815   AAUAAAAAGAAACGGAAGGAG   835

2.5 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  |||||||||||||||||*||=
targets:225   AAUAAAAAGAAACGGAGAGAG   245

2.5 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
EU968044.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  **||||||||||||||||||=
targets:1085   UCUAAAAAGAAACGGAGGGAG   1105

1.0 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  **||||||||||||||||||=
targets:973   UCUAAAAAGAAACGGAGGGAG   993

1.0 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
JB167690.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-|||||*|||||||||||||
targets:65   AACUAAAACGAAACGGAGGGAA   86

3.0 Sequence 5354 from Patent EP2559767 NA coding protein psRNATarget
LQ239359.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-|||||*|||||||||||||
targets:65   AACUAAAACGAAACGGAGGGAA   86

3.0 Sequence 5354 from Patent EP2985353 NA coding protein psRNATarget
HI407229.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-|||||*|||||||||||||
targets:65   AACUAAAACGAAACGGAGGGAA   86

3.0 Sequence 5354 from Patent EP2074227 NA coding protein psRNATarget
HI407270.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-|||||*|||||||||||||
targets:66   AACUAAAACGAAACGGAGGGAA   87

3.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
JB167731.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-|||||*|||||||||||||
targets:66   AACUAAAACGAAACGGAGGGAA   87

3.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
LQ239400.1
ncRNA:21   UU-AUUUUUCUUUGCCUCCCUU   1
  ||-|||||*|||||||||||||
targets:66   AACUAAAACGAAACGGAGGGAA   87

3.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
BT068480.1
ncRNA:21   UUAUUUUUCUUUGCCUCCCUU   1
  ||*|||||||||||*||||||
targets:1704   AAGAAAAAGAAACGAAGGGAA   1724

2.5 Zea mays full-length cDNA clone ZM_BFb0215L02 mRNA, complete cds NA coding protein psRNATarget
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