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BaseInfo

ncRNA ID	novel_zma_miR7523
Species	Zea mays
Class	miRNA
Genome position	Chr1:24300933-24301028 [-]
Reference genome	RefGen_v4
Source	SRR2647467
Length	24
Mature sequence(if miRNA)	1 - AGGAUCUAUAAAGUGACAGAUUAU - 24
Stem-loop(if miRNA)	--      --   G      GAA       AUUAUUA GAUUACGUGCGGA   AAUCUG  GCU UGUAGA   UCUGAGU       G             G   ||||||  ||| ||||||   |||||||       |             G   UUAGAC  UGA AUAUCU   GGACUCG       C             A UA      AG   A      --A       ---GAUA CUUUUGAAAUAAA
Stem-loop sequence	AAUCUGGCUGUGUAGAGAAUCUGAGUAUUAUUAGGAUUACGUGCGGAGGAAAAUAAAGUUUUCCAUAGGCUCAGGAUCUAUAAAGUGACAGAUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ060395.1	ncRNA:24   UAUUAGACAGUGAAAUAUCUAGGA   1   =|||||||||=||||||||||||| targets:72   GUAAUCUGUCGCUUUAUAGAUCCU   95 Target Full Sequence	1.0	TSA: Zea mays contig61517, mRNA sequence	NA	coding protein	psRNATarget
FJ805744.1	ncRNA:24   UAUUAGACAGUGAAAUAUCUAGGA   1   =*||||*||||||||*|||||||| targets:2351   GGAAUCCGUCACUUUCUAGAUCCU   2374 Target Full Sequence	2.5	Zea mays CDPK protein (CK1) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177007.2	ncRNA:24   UAUUAGACAGUGAAAUAUCUAGGA   1   =*||||*||||||||*|||||||| targets:2351   GGAAUCCGUCACUUUCUAGAUCCU   2374 Target Full Sequence	2.5	Zea mays calcium dependent protein kinase4 (IDP2562), mRNA	NA	coding protein	psRNATarget
BT033622.1	ncRNA:24   UAUUAGACAGUGAAAUAUCUAGGA   1   =*||||*||||||||*|||||||| targets:1311   GGAAUCCGUCACUUUCUAGAUCCU   1334 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0117M03 mRNA, complete cds	NA	coding protein	psRNATarget
BT087362.1	ncRNA:24   UAUUAGACAGUGAAAUAUCUAGGA   1   =*||||*||||||||*|||||||| targets:1124   GGAAUCCGUCACUUUCUAGAUCCU   1147 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0054C12 mRNA, complete cds	NA	coding protein	psRNATarget
EU963449.1	ncRNA:24   UAUUAGACAGUGAAAUAUCUAGGA   1   =*||||*||||||||*|||||||| targets:631   GAAAUCCGUCACUUUCUAGAUCCU   654 Target Full Sequence	2.5	Zea mays clone 262668 mRNA sequence	NA	coding protein	psRNATarget