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BaseInfo

ncRNA ID	novel_zma_miR7506
Species	Zea mays
Class	miRNA
Genome position	Chr9:88641069-88641171 [+]
Reference genome	RefGen_v4
Source	SRR2647467
Length	22
Mature sequence(if miRNA)	1 - GCUUCCUGACUCCCCUUGUGGU - 22
Stem-loop(if miRNA)	-    -C   A U -    UG   U       ----C    - CAUCUUCCAUCU  GCUU  CUG C C CCCU  UGG CGAUCUG     AGAU G            C  ||||  ||| | | ||||  ||| |||||||     |||| |            C  CGGG  GAC G G GGGA  GUC GUUGGAC     GGGA U            C A    AA   - U C    GU   -       ACGGC    G GUUGUUCGAGAU
Stem-loop sequence	GCUUCCUGACUCCCCUUGUGGUCGAUCUGCAGAUGCAUCUUCCAUCUCCCUAGAGCUUGUUGUGAGGGCGGCACAGGUUGCUGUGAGGGCGUGCAGAAGGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001157503.2	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =|=|||=||||||*|||||||| targets:7   GCUACAGGGGGAGGCAGGAAGC   28 Target Full Sequence	2.5	Zea mays calcium sensing receptor (LOC100284608), mRNA	NA	coding protein	psRNATarget
EU969029.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =|=|||=||||||*|||||||| targets:8   GCUACAGGGGGAGGCAGGAAGC   29 Target Full Sequence	2.5	Zea mays clone 325661 calcium sensing receptor mRNA, complete cds	NA	coding protein	psRNATarget
EZ112698.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   *=|*|||||||||||||||||= targets:112   UUCUCAAGGGGAGUCAGGAAGU   133 Target Full Sequence	2.0	TSA: Zea mays contig48359, mRNA sequence	NA	coding protein	psRNATarget
XM_020553489.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:3110   GGGACAAGAGGAGUCAGGGAGC   3131 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020553488.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:3517   GGGACAAGAGGAGUCAGGGAGC   3538 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_020553487.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:3706   GGGACAAGAGGAGUCAGGGAGC   3727 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020553485.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:3742   GGGACAAGAGGAGUCAGGGAGC   3763 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020553483.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:3825   GGGACAAGAGGAGUCAGGGAGC   3846 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020553484.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:3950   GGGACAAGAGGAGUCAGGGAGC   3971 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020553486.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:4107   GGGACAAGAGGAGUCAGGGAGC   4128 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020553482.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:4203   GGGACAAGAGGAGUCAGGGAGC   4224 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020553481.1	ncRNA:22   UGGUGUUCCCCUCAGUCCUUCG   1   =**|||||*|||||||||=||| targets:4216   GGGACAAGAGGAGUCAGGGAGC   4237 Target Full Sequence	2.5	PREDICTED: Zea mays putative DUF593 domain containing family protein (LOC100382517), transcript variant X1, mRNA	NA	coding protein	psRNATarget