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BaseInfo

ncRNA ID	novel_zma_miR7485
Species	Zea mays
Class	miRNA
Genome position	Chr7:906157-906339 [-]
Reference genome	RefGen_v4
Source	SRR2647467
Length	24
Mature sequence(if miRNA)	1 - UUGAUGUGAUCCGAGCUAAACUUU - 24
Stem-loop(if miRNA)	--AA      C  U U  -              ACCUCCGUUCC      U        --U       UAAAACUAAUUUGUCAGCCGAAGA     UUUAGC UC G UC CAUCGAAUGUUUGA           GGGUAU AAAUGUAG   CGGAUUA                        U     |||||| || | || ||||||||||||||           |||||| ||||||||   |||||||                        U     AAAUCG AG C AG GUAGUUUGCAAACU           CUCAUA UUUAUAUC   GUUGGUU                        A UUUC      -  C U  U              GAAAAUUUAUC      C        UAG       GGCCUGAUCUAAGCAGAGCAGAAA
Stem-loop sequence	AAUUUAGCCUCUGUUCCAUCGAAUGUUUGAACCUCCGUUCCGGGUAUUAAAUGUAGUCGGAUUAUAAAACUAAUUUGUCAGCCGAAGAUUAAAAGACGAGACGAAUCUAGUCCGGUUGGUUGGAUCUAUAUUUCAUACUCCUAUUUAAAAGUCAAACGUUUGAUGUGAUCCGAGCUAAACUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654002.2	ncRNA:24   UUUCAAAUCGAGCCUAGUGUAGUU   1   ||||||||||||||=||||||||| targets:704   AAAGUUUAGCUCGGGUCACAUCAA   727 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103632177), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008654001.2	ncRNA:24   UUUCAAAUCGAGCCUAGUGUAGUU   1   ||||||||||||||=||||||||| targets:703   AAAGUUUAGCUCGGGUCACAUCAA   726 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC103632177), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT084930.2	ncRNA:24   UUUCAAAUCGAGCCUAGUGUAGUU   1   ||||||||||*|||=||||||||| targets:144   AAAGUUUAGCCCGGGUCACAUCAA   167 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0209B02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671848.2	ncRNA:24   UUUCAAAUCGAGCCUAGUGUAGUU   1   ||||||||||*|||=||||||||| targets:661   AAAGUUUAGCCCGGGUCACAUCAA   684 Target Full Sequence	2.5	PREDICTED: Zea mays subtilisin-like protease SBT3.3 (LOC103647304), mRNA	NA	coding protein	psRNATarget
XM_020540529.1	ncRNA:24   UUUCAAAUCGAGCCUAGUGUAGUU   1   ||||||||||*|||=||||||||| targets:1104   AAAGUUUAGCCCGGGUCACAUCAA   1127 Target Full Sequence	2.5	PREDICTED: Zea mays catalytic/ hydrolase (LOC100282156), transcript variant X1, mRNA	NA	coding protein	psRNATarget