Search result

BaseInfo

ncRNA ID novel_zma_miR7482
Species Zea mays
Class miRNA
Genome position Chr7:32070417-32070541 [+]
Reference genome RefGen_v4
Source SRR2647467
Length 24
Mature sequence(if miRNA) 1 - ACCGUCACUAGAAAUCGUAUUUCU - 24
Stem-loop(if miRNA) --   GU   U                         C           C   UG        
  ACC  CAC AGAAAUCGUAUUUCUAUAGGCGGUU CUUAAGAAAAC GCU  UAAAAAUUC
  |||  ||| ||||||||||||||||||||||||| ||||||||||| |||  ||||||||A
  UGG  GUG UCUUUAGCAUAAAGAUGUCUGCCGA GAAUUCUUUUG CGG  AUUUUUAGU
UU   UG   U                         U           A   UG        
Stem-loop sequence ACCGUCACUAGAAAUCGUAUUUCUAUAGGCGGUUCCUUAAGAAAACCGCUUGUAAAAAUUCAUGAUUUUUAGUGGCAGUUUUCUUAAGUAGCCGUCUGUAGAAAUACGAUUUCUUGUGGUGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163546.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2559767 NA coding protein psRNATarget
LQ235215.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2985353 NA coding protein psRNATarget
HI403085.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2074227 NA coding protein psRNATarget