ncRNA ID | osa-miRf10345-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - AGGAUGAGGACGUGGCAUCCU - NA |
Stem-loop(if miRNA) |
U   C               C        C     AUUUCGU  C  GUU CAUCUAGGAUGAGGA GUGGCAUC UAUUA       GC A  ||| ||||||||||||||| |||||||| |||||       ||  CAA GUAGAUCCUGCUCCU CACCGUAG AUAAU       CG U A   A               A        U     ----GAU  G |
Stem-loop sequence | UGUUCCAUCUAGGAUGAGGACGUGGCAUCCUAUUAAUUUCGUGCCAUGGCUAGUAAUAUGAUGCCACAUCCUCGUCCUAGAUGAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288887.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090079L15, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015768630.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group transmembrane protein 56-B (LOC4327490), transcript variant X5, mRNA | transmembrane protein 56-B(LOC4327490) | coding protein | psRNATarget |