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BaseInfo

ncRNA ID osa-miRf10345-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AGGAUGAGGACGUGGCAUCCU - NA
Stem-loop(if miRNA) U   C               C        C     AUUUCGU  C
 GUU CAUCUAGGAUGAGGA GUGGCAUC UAUUA       GC A
 ||| ||||||||||||||| |||||||| |||||       ||
 CAA GUAGAUCCUGCUCCU CACCGUAG AUAAU       CG U
A   A               A        U     ----GAU  G
Stem-loop sequence UGUUCCAUCUAGGAUGAGGACGUGGCAUCCUAUUAAUUUCGUGCCAUGGCUAGUAAUAUGAUGCCACAUCCUCGUCCUAGAUGAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288887.1
ncRNA:21   UCCUACGGUGCAGGAGUAGGA   1
  |||||||||=|||||||||||
targets:2070   AGGAUGCCAUGUCCUCAUCCU   2090

1.5 Oryza sativa Japonica Group cDNA, clone: J090079L15, full insert sequence NA coding protein psRNATarget
XM_015768630.1
ncRNA:21   UCCUACGGUGCAGGAGUAGGA   1
  |*||||||||||||||||*||
targets:354   AUGAUGCCACGUCCUCAUACU   374

1.5 PREDICTED: Oryza sativa Japonica Group transmembrane protein 56-B (LOC4327490), transcript variant X5, mRNA transmembrane protein 56-B(LOC4327490) coding protein psRNATarget