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BaseInfo

ncRNA ID novel_zma_miR7464
Species Zea mays
Class miRNA
Genome position Chr6:157263613-157263786 [-]
Reference genome RefGen_v4
Source SRR2647467
Length 24
Mature sequence(if miRNA) 151 - GUCGUUCUAUGCUUUUGUUAGCAU - 174
Stem-loop(if miRNA) --GUC                  C     CG UACC      A             A  A   U     CC   AAAA   U     U  U
     GUUCUAUGCUUUUGUUAG AUCUU  A    AGGUUA GAAUGUUUACAUA CU UAG AAAAU  AUA    CGU CGUGA AG U
     |||||||||||||||||| |||||  |    |||||| ||||||||||||| || ||| |||||  |||    ||| ||||| ||
     CAGGAUACGAAAACAAUC UAGAA  U    UCCAAU CUUAUAAAUGUAU GG AUU UUUUA  UAU    GCG GUAUU UC U
AAUGA                  A     AA ---U      -             -  A   -     CA   -GAG   -     U  G
Stem-loop sequence GUCGUUCUAUGCUUUUGUUAGCAUCUUCGAUACCAGGUUAAGAAUGUUUACAUAACUAUAGUAAAAUCCAUAAAAACGUUCGUGAUAGUUUGCUUUUAUGGCGGAGUAUACAUUUUUUAAGGUAUGUAAAUAUUCUAACCUUUAAAAGAUACUAACAAAAGCAUAGGACAGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110158.1
ncRNA:24   UACGAUUGUUUUCGUAUCUUGCUG   1
  |**=||||||||||||||||=||*
targets:30   ACAUUAACAAAAGCAUAGAAUGAA   53

2.5 Zea mays CL11825_1 mRNA sequence NA coding protein psRNATarget
XM_008653225.2
ncRNA:24   UACGAUUGUUUUCGUAUCUUGCUG   1
  *|**||||=|=||||||||||||=
targets:3869   UUAAUAACGAGAGCAUAGAACGAU   3892

3.0 PREDICTED: Zea mays uncharacterized LOC103631768 (LOC103631768), mRNA NA coding protein psRNATarget