ncRNA ID | novel_zma_miR7464 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:157263613-157263786 [-] |
Reference genome | RefGen_v4 |
Source | SRR2647467 |
Length | 24 |
Mature sequence(if miRNA) | 151 - GUCGUUCUAUGCUUUUGUUAGCAU - 174 |
Stem-loop(if miRNA) |
--GUC                  C     CG UACC      A             A  A   U     CC   AAAA   U     U  U      GUUCUAUGCUUUUGUUAG AUCUU  A    AGGUUA GAAUGUUUACAUA CU UAG AAAAU  AUA    CGU CGUGA AG U      |||||||||||||||||| |||||  |    |||||| ||||||||||||| || ||| |||||  |||    ||| ||||| ||      CAGGAUACGAAAACAAUC UAGAA  U    UCCAAU CUUAUAAAUGUAU GG AUU UUUUA  UAU    GCG GUAUU UC U AAUGA                  A     AA ---U      -             -  A   -     CA   -GAG   -     U  G |
Stem-loop sequence | GUCGUUCUAUGCUUUUGUUAGCAUCUUCGAUACCAGGUUAAGAAUGUUUACAUAACUAUAGUAAAAUCCAUAAAAACGUUCGUGAUAGUUUGCUUUUAUGGCGGAGUAUACAUUUUUUAAGGUAUGUAAAUAUUCUAACCUUUAAAAGAUACUAACAAAAGCAUAGGACAGUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY110158.1 |
|
2.5 | Zea mays CL11825_1 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008653225.2 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC103631768 (LOC103631768), mRNA | NA | coding protein | psRNATarget |