Search result

BaseInfo

ncRNA ID novel_zma_miR7463
Species Zea mays
Class miRNA
Genome position Chr5:193222126-193222260 [+]
Reference genome RefGen_v4
Source SRR2647467
Length 24
Mature sequence(if miRNA) 112 - ACCGUCCGCCUCUGUGCAGAGAGC - 135
Stem-loop(if miRNA) --  -      C   UC      C     -  - CU U   GC    C       -    ACCA  AA  AC
  UC CUGCAC AGG  GCGGAC GUCCG GC C  G GCC  GGAC GUCCGCG CCUG    GA  GC  C
  || |||||| |||  |||||| ||||| || |  | |||  |||| ||||||| ||||    ||  ||
  AG GACGUG UCU  CGCCUG CAGGC CG G  C CGG  CCUG CAGGCGC GGAC    CU  CG  G
CG  A      -   -C      C     G  C CC C   --    C       C    CACG  -C  CC
Stem-loop sequence UCCUGCACCAGGUCGCGGACCGUCCGGCCCUGUGCCGCGGACCGUCCGCGCCUGACCAGAAAGCACCGCCGCCUCGCACCAGGCCGCGGACCGUCCGGCCCCCGCGCGCGGACCGUCCGCCUCUGUGCAGAGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU970066.1
ncRNA:24   CGAGAGACGUGUCUCCGCCUGCCA   1
  ||*||||||||||=||||||||||
targets:821   GCCCUCUGCACAGGGGCGGACGGU   844

1.5 Zea mays clone 339328 mRNA sequence NA coding protein psRNATarget