ncRNA ID | novel_zma_miR7462 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:193213428-193213562 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647467 |
Length | 24 |
Mature sequence(if miRNA) | 112 - ACCGUCCGCCUCUGUGCAGAGAGC - 135 |
Stem-loop(if miRNA) |
--  -      C   UC      C     -  - CU U   GC    C       -    ACCA  AA  AC   UC CUGCAC AGG  GCGGAC GUCCG GC C  G GCC  GGAC GUCCGCG CCUG    GA  GC  C   || |||||| |||  |||||| ||||| || |  | |||  |||| ||||||| ||||    ||  ||   AG GACGUG UCU  CGCCUG CAGGC CG G  C CGG  CCUG CAGGCGC GGAC    CU  CG  G CG  A      -   -C      C     G  C CC C   --    C       C    CACG  -C  CC |
Stem-loop sequence | UCCUGCACCAGGUCGCGGACCGUCCGGCCCUGUGCCGCGGACCGUCCGCGCCUGACCAGAAAGCACCGCCGCCUCGCACCAGGCCGCGGACCGUCCGGCCCCCGCGCGCGGACCGUCCGCCUCUGUGCAGAGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU970066.1 |
|
1.5 | Zea mays clone 339328 mRNA sequence | NA | coding protein | psRNATarget |