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BaseInfo

ncRNA ID novel_zma_miR7460
Species Zea mays
Class miRNA
Genome position Chr5:114821698-114821752 [+]
Reference genome RefGen_v4
Source SRR2647467
Length 22
Mature sequence(if miRNA) 34 - UUAAUUUAAGAACGUGGGUACU - 55
Stem-loop(if miRNA) --    G          -    G  AUG
  UACC ACGUUCUUAA UUAG UU   U
  |||| |||||||||| |||| ||
  AUGG UGCAAGAAUU AAUU GA   U
UC    G          U    G  CGC
Stem-loop sequence UACCGACGUUCUUAAUUAGGUUAUGUUCGCAGGUUAAUUUAAGAACGUGGGUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235546.1
ncRNA:22   UCAUGGGUGCAAGAAUUUAAUU   1
  =|||||||||||||||*|||||
targets:62   GGUACCCACGUUCUUAUAUUAA   83

1.5 Sequence 1541 from Patent EP2985353 NA coding protein psRNATarget
HI403416.1
ncRNA:22   UCAUGGGUGCAAGAAUUUAAUU   1
  =|||||||||||||||*|||||
targets:62   GGUACCCACGUUCUUAUAUUAA   83

1.5 Sequence 1541 from Patent EP2074227 NA coding protein psRNATarget
JB163877.1
ncRNA:22   UCAUGGGUGCAAGAAUUUAAUU   1
  =|||||||||||||||*|||||
targets:62   GGUACCCACGUUCUUAUAUUAA   83

1.5 Sequence 1541 from Patent EP2559767 NA coding protein psRNATarget