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BaseInfo

ncRNA ID novel_zma_miR7456
Species Zea mays
Class miRNA
Genome position Chr1:199250688-199250734 [+]
Reference genome RefGen_v4
Source SRR2647467
Length 23
Mature sequence(if miRNA) 1 - CUUGUUGAGUGUUUGACGCUCCA - 23
Stem-loop(if miRNA) --C     G      U    -  CC
   UUGUU AGUGUU GACG CU  A
   ||||| |||||| |||| ||
   AACAA UCACAA CUGC GA  A
UAU     -      -    A  AA
Stem-loop sequence CUUGUUGAGUGUUUGACGCUCCAAAAAGACGUCAACACUAACAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175289.1
ncRNA:23   ACCUCGCAGUUUGUGAGUUGUUC   1
  |||||||*||||||||||||||*
targets:1633   UGGAGCGCCAAACACUCAACAAA   1655

2.0 Zea mays uncharacterized LOC100382557 (LOC100382557), mRNA NA coding protein psRNATarget
BT064749.1
ncRNA:23   ACCUCGCAGUUUGUGAGUUGUUC   1
  |||||||*||||||||||||||*
targets:1633   UGGAGCGCCAAACACUCAACAAA   1655

2.0 Zea mays full-length cDNA clone ZM_BFb0101G18 mRNA, complete cds NA coding protein psRNATarget
EU970066.1
ncRNA:23   ACCUCGCAGUUUGUGAGUUGUUC   1
  *||||||||||||||||||*||*
targets:784   CGGAGCGUCAAACACUCAAGAAA   806

2.5 Zea mays clone 339328 mRNA sequence NA coding protein psRNATarget