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BaseInfo

ncRNA ID novel_zma_miR7450
Species Zea mays
Class miRNA
Genome position Chr5:87892937-87893049 [-]
Reference genome RefGen_v4
Source SRR2647467
Length 24
Mature sequence(if miRNA) 90 - ACCGUCACUAGAAAUCGUAUUUCU - 113
Stem-loop(if miRNA) ---                            GU                 AUAAAUU
   ACCGUCACUAGAAAUCGUAUUUCUACAG  GGUUCUUUAAGAAAACC       U
   ||||||||||||||||||||||||||||  |||||||||||||||||
   UGGCAGUGAUCUUUAGCAUAAAGAUGUC  CUAAGGAAUUCUUUUGG       G
UUU                            UG                 CGUACAU
Stem-loop sequence ACCGUCACUAGAAAUCGUAUUUCUACAGGUGGUUCUUUAAGAAAACCAUAAAUUUGUACAUGCGGUUUUCUUAAGGAAUCGUCUGUAGAAAUACGAUUUCUAGUGACGGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403085.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2074227 NA coding protein psRNATarget
JB163546.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2559767 NA coding protein psRNATarget
LQ235215.1
ncRNA:24   UCUUUAUGCUAAAGAUCACUGCCA   1
  |||||||=|||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

2.5 Sequence 1210 from Patent EP2985353 NA coding protein psRNATarget