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BaseInfo

ncRNA ID	novel_zma_miR7448
Species	Zea mays
Class	miRNA
Genome position	Chr1:262405696-262405816 [+]
Reference genome	RefGen_v4
Source	SRR1743455
Length	24
Mature sequence(if miRNA)	1 - AUGUUUGGAAACAAGAGUAUUGGA - 24
Stem-loop(if miRNA)	--A         AC   A      G    -                       C    CAA    UGUUUGGAA  AAG GUAUUG AGGG AUUGAGGGGGCUAUAAUCCCUUG UAUU   A    |||||||||  ||| |||||| |||| ||||||||||||||||||||||| ||||    ACAAACCUU  UUC CAUAAC UCCC UAACUCCCCCGAUAUUAGGGAAC AUAA   A CGA         GU   C      G    C                       A    AUU
Stem-loop sequence	AUGUUUGGAAACAAGAGUAUUGGAGGGAUUGAGGGGGCUAUAAUCCCUUGCUAUUCAAAAUUAAAUAACAAGGGAUUAUAGCCCCCUCAAUCCCCUGCAAUACCCUUUGUUCCAAACAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU958579.1	ncRNA:24   AGGUUAUGAGAACAAAGGUUUGUA   1   |=|||||||||||||||||||||| targets:116   UUCAAUACUCUUGUUUCCAAACAU   139 Target Full Sequence	0.0	Zea mays clone 1703813 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008654031.2	ncRNA:24   AGGUUAUGAGAACAAAGGUUUGUA   1   ||||*||||||||*|||||||||* targets:1689   UCCAUUACUCUUGCUUCCAAACAA   1712 Target Full Sequence	2.5	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT068953.1	ncRNA:24   AGGUUAUGAGAACAAAGGUUUGUA   1   ||==*||=||||*||||||||||| targets:505   UCUGCUAUUCUUUUUUCCAAACAU   528 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0030J18 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008657468.2	ncRNA:24   AGGUUAUGAGAACAAAGGUUUGUA   1   ||==*||||||||*|||||||||* targets:3556   UCUGUUACUCUUGCUUCCAAACAA   3579 Target Full Sequence	2.5	PREDICTED: Zea mays DExH-box ATP-dependent RNA helicase DExH10 (LOC103634889), mRNA	NA	coding protein	psRNATarget