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BaseInfo

ncRNA ID	novel_zma_miR7442
Species	Zea mays
Class	miRNA
Genome position	Chr3:234643132-234643213 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	59 - AUAUGUCUCUGUUGCAACGCACGA - 82
Stem-loop(if miRNA)	--                           -    GUGACUU   GUGCGUUGCAACGGGGACAUAUAAUAU CACA       A   ||||||||||||||||||||||||||| ||||       U   CACGCAACGUUGUCUCUGUAUAUUAUG GUGU       A AG                           U    AAAAUAU
Stem-loop sequence	GUGCGUUGCAACGGGGACAUAUAAUAUCACAGUGACUUAUAUAUAAAAUGUGUGUAUUAUAUGUCUCUGUUGCAACGCACGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU976580.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   *||||||||||||||||||||||| targets:1329   CCGUGCGUUGCAACAGAGACAUAU   1352 Target Full Sequence	0.0	Zea mays clone 984060 zinc transporter 2 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546475.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   *||||||||||||||||||||||| targets:1245   CCGUGCGUUGCAACAGAGACAUAU   1268 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC109943445 (LOC109943445), mRNA	NA	coding protein	psRNATarget
JB169072.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   *|||||||||||||=||||||||| targets:7   CCGUGCGUUGCAACGGAGACAUAU   30 Target Full Sequence	1.5	Sequence 6736 from Patent EP2559767	NA	coding protein	psRNATarget
HI408611.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   *|||||||||||||=||||||||| targets:7   CCGUGCGUUGCAACGGAGACAUAU   30 Target Full Sequence	1.5	Sequence 6736 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240741.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   *|||||||||||||=||||||||| targets:7   CCGUGCGUUGCAACGGAGACAUAU   30 Target Full Sequence	1.5	Sequence 6736 from Patent EP2985353	NA	coding protein	psRNATarget
HI407251.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   |||*|||||||||||||||=|||| targets:13   UCGNGCGUUGCAACAGAGAUAUAU   36 Target Full Sequence	1.5	Sequence 5376 from Patent EP2074227	NA	coding protein	psRNATarget
JB167712.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   |||*|||||||||||||||=|||| targets:13   UCGNGCGUUGCAACAGAGAUAUAU   36 Target Full Sequence	1.5	Sequence 5376 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239381.1	ncRNA:24   AGCACGCAACGUUGUCUCUGUAUA   1   |||*|||||||||||||||=|||| targets:13   UCGNGCGUUGCAACAGAGAUAUAU   36 Target Full Sequence	1.5	Sequence 5376 from Patent EP2985353	NA	coding protein	psRNATarget