Search result

BaseInfo

ncRNA ID novel_zma_miR7440
Species Zea mays
Class miRNA
Genome position Chr3:187183943-187184027 [+]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 62 - CUCUGAUCCUCCCGGUAUUCCGGA - 85
Stem-loop(if miRNA) --A     C                         -      GA
   GGGAU CCGGGAGGAUUAGAGGGAAUUGAGG GGAAAU  A
   ||||| ||||||||||||||||||||||||| ||||||
   CCUUA GGCCCUCCUAGUCUCCCUUAACUCC CCUUUA  C
AGG     U                         G      AU
Stem-loop sequence AGGGAUCCCGGGAGGAUUAGAGGGAAUUGAGGGGAAAUGAACUAAUUUCCGCCUCAAUUCCCUCUGAUCCUCCCGGUAUUCCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008667467.2
ncRNA:24   AGGCCUUAUGGCCCUCCUAGUCUC   1
  *|=||||*|||||||||||||*||
targets:1958   GCUGGAAGACCGGGAGGAUCAAAG   1981

2.5 PREDICTED: Zea mays L-type lectin-domain containing receptor kinase IV.1 (LOC103644260), mRNA NA coding protein psRNATarget