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BaseInfo

ncRNA ID	novel_zma_miR7435
Species	Zea mays
Class	miRNA
Genome position	Chr10:22395590-22395693 [-]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	81 - GAUAUUACAUGUGUAUUGAAGUGU - 104
Stem-loop(if miRNA)	--    UUA            A   -        G  AUUGAUAAGUAUUUUG   GAUA   CAUGUGUAUUGA GUG UAUUGGGU GA                A   ||||   |||||||||||| ||| |||||||| ||   CUAU   GUGUACAUAACU CAC AUAACUCG CC                U CA    UAG            -   C        G  AAAUUUAGGUAAUAUU
Stem-loop sequence	GAUAUUACAUGUGUAUUGAAGUGUAUUGGGUGGAAUUGAUAAGUAUUUUGAUUUAUAAUGGAUUUAAACCGGCUCAAUACCACUCAAUACAUGUGGAUUAUCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681684.2	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||||||||||||||||||||| targets:2894   ACACUUCAAUACACAUGUAAUAUC   2917 Target Full Sequence	0.0	PREDICTED: Zea mays pyrophosphate-energized vacuolar membrane proton pump (LOC103654862), mRNA	NA	coding protein	psRNATarget
HI406890.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||||||||||||||||||||| targets:110   ACACUUCAAUACACAUGUAAUAUC   133 Target Full Sequence	0.0	Sequence 5015 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239020.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||||||||||||||||||||| targets:110   ACACUUCAAUACACAUGUAAUAUC   133 Target Full Sequence	0.0	Sequence 5015 from Patent EP2985353	NA	coding protein	psRNATarget
JB167351.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||||||||||||||||||||| targets:110   ACACUUCAAUACACAUGUAAUAUC   133 Target Full Sequence	0.0	Sequence 5015 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008668946.2	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:2367   ACACUCCAAUACACAUGUAAUAUC   2390 Target Full Sequence	1.0	PREDICTED: Zea mays Transmembrane 9 superfamily member 9 (LOC100193342), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008660051.2	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:1602   ACACUCCAAUACACAUGUAAUAUC   1625 Target Full Sequence	1.0	PREDICTED: Zea mays putative MADS-box transcription factor family protein (MADS71), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001138477.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:1255   ACACUCCAAUACACAUGUAAUAUC   1278 Target Full Sequence	1.0	Zea mays Transmembrane 9 superfamily member 9 (LOC100193342), mRNA	NA	coding protein	psRNATarget
BT035580.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:1255   ACACUCCAAUACACAUGUAAUAUC   1278 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0070I12 mRNA, complete cds	NA	coding protein	psRNATarget
BT062534.2	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:81   ACACUCCAAUACACAUGUAAUAUC   104 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0310N08 mRNA, complete cds	NA	coding protein	psRNATarget
AY112306.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:118   ACACUCCAAUACACAUGUAAUAUC   141 Target Full Sequence	1.0	Zea mays CL30631_-1 mRNA sequence	NA	coding protein	psRNATarget
EU941886.1	ncRNA:24   UGUGAAGUUAUGUGUACAUUAUAG   1   |||||*|||||||||||||||||| targets:157   ACACUCCAAUACACAUGUAAUAUC   180 Target Full Sequence	1.0	Zea mays clone 1471521 mRNA sequence	NA	coding protein	psRNATarget