ncRNA ID | osa-miRf10340-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UCAAUCCUGCGAUUCAAAGGGG - NA |
Stem-loop(if miRNA) |
     C   A                  G          G   AA GUUUU UCA UCCUGCGAUUCAAAGGGG CCUUAGGAUA GAA  A ||||| ||| |||||||||||||||||| |||||||||| ||| CAAAA AGU AGGAUGCUAAGUUUCCCC GGGAUUUUAU CUU  C      A   A                  -          A   CC |
Stem-loop sequence | GUUUUCUCAAUCCUGCGAUUCAAAGGGGGCCUUAGGAUAGGAAAAACCCUUCAUAUUUUAGGGCCCCUUUGAAUCGUAGGAAUGAAAAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288347.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090023M08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015779631.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group trinucleotide repeat-containing gene 18 protein-like (LOC107280680), mRNA | trinucleotide repeat-containing gene 18 protein-like(LOC107280680) | coding protein | psRNATarget |