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BaseInfo

ncRNA ID ath-miRf10082-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - ACUCGACCUGGGGUCGAGUGGU - NA
Stem-loop(if miRNA)     G  G         U          -U  A  G A
GAGG CA UCGACCUCG GGUCGAGUGG  GA GU A G
|||| || ||||||||| ||||||||||  || || | U
CUCU GU AGCUGGGGU CCAGCUCAUC  CU UA U G
    G  G         -          UU  G  G G
Stem-loop sequence GAGGGCAGUCGACCUCGUGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCUUCUACUCGACCUGGGGUCGAGUGGUCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183194.1
ncRNA:22   UGGUGAGCUGG-GGUCCAGCUCA   1
  |||||||||||-|||||||||||
targets:448   ACCACUCGACCACCAGGUCGAGU   470

3.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
AY231407.1
ncRNA:22   UGGUGAGCUGGGGU-CCAGCUCA   1
  ||||||||||||||-||||||||
targets:534   ACCACUCGACCCCAUGGUCGAGU   556

3.0 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
NM_103391.1
ncRNA:22   UGGUGAGCUGGGG-UCCAGCUCA   1
  |||||||||||||-|||||||||
targets:1103   ACCACUCGACCCCCAGGUCGAGU   1125

3.0 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
AY227642.1
ncRNA:22   UGGUGAGCUGGGG-UCCAGCUCA   1
  |||||||||||||-|||||||||
targets:853   ACCACUCGACCCCGAGGUCGAGU   875

3.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:22   UGGUGAGCUGGGG-UCCAGCUCA   1
  |=|||||||||||-|||||||||
targets:1616   AUCACUCGACCCCGAGGUCGAGU   1638

3.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
BT025674.1
ncRNA:22   UGGUGAGCUGGGG-UCCAGCUCA   1
  *|=||||||||||-|||||||||
targets:186   UCUACUCGACCCCCAGGUCGAGU   208

3.0 Arabidopsis thaliana NA coding protein psRNATarget