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BaseInfo

ncRNA ID osa-miRf10339-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - CCCUCUAAUUUGGGACGGAGGGA - NA
Stem-loop(if miRNA) CA                       C   UAG     A  GA    AUACCAACAUGCUUUAC
  CCCUCUAAUUUGGGACGGAGGGA UAC   CAAAG UG  UCUG                 A
  ||||||||||||||||||||||| |||   ||||| ||  ||||
  GGGAGGUUAGACCCUGUCUCCCU AUG   GUUUC AC  UCGG                 U
GC                       C   ---     A  -G    AAAGUUGAAAGUACUAG
Stem-loop sequence CACCCUCUAAUUUGGGACGGAGGGACUACUAGCAAAGAUGGAUCUGAUACCAACAUGCUUUACAUGAUCAUGAAAGUUGAAAGGCUGCAACUUUGGUACUCCCUCUGUCCCAGAUUGGAGGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015764075.1
ncRNA:23   AGGGAGGCAGGGUUUAAUCUCCC   1
  ||=|||||||||||||||*|||*
targets:1272   UCUCUCCGUCCCAAAUUAUAGGA   1294

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351674 (LOC4351674), transcript variant X1, mRNA uncharacterized LOC4351674(LOC4351674) coding protein psRNATarget
AK119279.1
ncRNA:23   AGGGAGGCAGGGUUUAAUCUCCC   1
  ||||||*|||||||||||*||||
targets:1580   UCCCUCAGUCCCAAAUUAUAGGG   1602

2.5 Oryza sativa Japonica Group cDNA clone:001-130-B12, full insert sequence NA coding protein psRNATarget
AK066347.1
ncRNA:23   AGGGAGGCAGGGUUUAAUCUCCC   1
  |||||||*||||||||||*||||
targets:2673   UCCCUCCAUCCCAAAUUAUAGGG   2695

2.5 Oryza sativa Japonica Group cDNA clone:J013065B13, full insert sequence NA coding protein psRNATarget