ncRNA ID | osa-miRf10339-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - CCCUCUAAUUUGGGACGGAGGGA - NA |
Stem-loop(if miRNA) |
CA                       C   UAG     A  GA    AUACCAACAUGCUUUAC   CCCUCUAAUUUGGGACGGAGGGA UAC   CAAAG UG  UCUG                 A   ||||||||||||||||||||||| |||   ||||| ||  ||||   GGGAGGUUAGACCCUGUCUCCCU AUG   GUUUC AC  UCGG                 U GC                       C   ---     A  -G    AAAGUUGAAAGUACUAG |
Stem-loop sequence | CACCCUCUAAUUUGGGACGGAGGGACUACUAGCAAAGAUGGAUCUGAUACCAACAUGCUUUACAUGAUCAUGAAAGUUGAAAGGCUGCAACUUUGGUACUCCCUCUGUCCCAGAUUGGAGGGCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015764075.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4351674 (LOC4351674), transcript variant X1, mRNA | uncharacterized LOC4351674(LOC4351674) | coding protein | psRNATarget | |||||||||
AK119279.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-130-B12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK066347.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013065B13, full insert sequence | NA | coding protein | psRNATarget |