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BaseInfo

ncRNA ID novel_zma_miR7413
Species Zea mays
Class miRNA
Genome position Chr1:77248654-77248703 [+]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 27 - GUAUGCCGAGCCUUCUUUGCCGAG - 50
Stem-loop(if miRNA) --               U  CG   C
  CGGCAAAGAAGGCUU GC  AUG A
  ||||||||||||||| ||  |||
  GCCGUUUCUUCCGAG CG  UAU U
GA               C  --   G
Stem-loop sequence CGGCAAAGAAGGCUUUGCCGAUGCAUGUAUGCCGAGCCUUCUUUGCCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ073532.1
ncRNA:24   GAGCCGUUUCUUCCGAGCCGUAUG   1
  **=**||||*|=||||||||||||
targets:28   GCUAUCAAAAAGGGCUCGGCAUAC   51

2.5 TSA: Zea mays contig09169, mRNA sequence NA coding protein psRNATarget