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BaseInfo

ncRNA ID novel_zma_miR7411
Species Zea mays
Class miRNA
Genome position Chr1:61731745-61731825 [+]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 1 - ACCGUCACUAGAAAUCAUAUUUCU - 24
Stem-loop(if miRNA) --          G    C  --         A      CCU
  ACCGUCACUA AAAU AU  AUUUCUACU GCGGUU   U
  |||||||||| |||| ||  ||||||||| ||||||   A
  UGGCGGUGAU UUUA UA  UAAAGAUGA CGCCAA   A
UU          G    A  CC         C      AAG
Stem-loop sequence ACCGUCACUAGAAAUCAUAUUUCUACUAGCGGUUCCUUAAGAAAACCGCCAGUAGAAAUCCAUAAUUUGUAGUGGCGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235215.1
ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1
  |||||||||||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

1.5 Sequence 1210 from Patent EP2985353 NA coding protein psRNATarget
JB163546.1
ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1
  |||||||||||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

1.5 Sequence 1210 from Patent EP2559767 NA coding protein psRNATarget
HI403085.1
ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1
  |||||||||||||||||||*||||
targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96

1.5 Sequence 1210 from Patent EP2074227 NA coding protein psRNATarget
LQ235142.1
ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1
  |*|||*|||||||||||||=||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24

2.5 Sequence 1137 from Patent EP2985353 NA coding protein psRNATarget
JB163473.1
ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1
  |*|||*|||||||||||||=||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24

2.5 Sequence 1137 from Patent EP2559767 NA coding protein psRNATarget
HI403012.1
ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1
  |*|||*|||||||||||||=||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24

2.5 Sequence 1137 from Patent EP2074227 NA coding protein psRNATarget