Search result

BaseInfo

ncRNA ID novel_zma_miR7410
Species Zea mays
Class miRNA
Genome position Chr1:8802869-8802930 [-]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 1 - CGAGAUCUAUGGCGUCGACCCCCU - 24
Stem-loop(if miRNA) --       GU               AUCGA
  GGGGUCG  GCCAUAGAUCUCGGC     G
  |||||||  |||||||||||||||
  CCCCAGC  CGGUAUCUAGAGCCG     G
UC       UG               CGACU
Stem-loop sequence GGGGUCGGUGCCAUAGAUCUCGGCAUCGAGGUCAGCGCCGAGAUCUAUGGCGUCGACCCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544775.1
ncRNA:24   UCCCCCAGCUGCGGUAUCUAGAGC   1
  |||||||||=||||||||||||=|
targets:62   AGGGGGUCGGCGCCAUAGAUCUUG   85

2.5 PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC109942650), mRNA NA coding protein psRNATarget
XM_020545863.1
ncRNA:24   UCCCCCAGCUGCGGUAUCUAGAGC   1
  =||||||||=||||||||||||=|
targets:128   GGGGGGUCGGCGCCAUAGAUCUUG   151

2.5 PREDICTED: Zea mays serine/arginine repetitive matrix protein 1-like (LOC109943065), mRNA NA coding protein psRNATarget
XM_020547098.1
ncRNA:24   UCCCCCAGCUGCGGUAUCUAGAGC   1
  =||||||||=||||||||||||=|
targets:128   GGGGGGUCGGCGCCAUAGAUCUUG   151

2.5 PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC103637036), mRNA NA coding protein psRNATarget
XM_008668233.1
ncRNA:24   UCCCCCAGCUGCGGUAUCUAGAGC   1
  *||||||||=||||||||||||=|
targets:182   CGGGGGUCGGCGCCAUAGAUCUUG   205

2.5 PREDICTED: Zea mays skin secretory protein xP2-like (LOC103645112), mRNA NA coding protein psRNATarget
XM_020538144.1
ncRNA:24   UCCCCCAGCUGCGGUAUCUAGAGC   1
  ||*||||||=||||||||||||=|
targets:104   AGAGGGUCGGCGCCAUAGAUCUUG   127

2.5 PREDICTED: Zea mays pEARLI1-like lipid transfer protein 1 (LOC103628601), mRNA NA coding protein psRNATarget
XM_020538176.1
ncRNA:24   UCCCCCAGCUGCGGUAUCUAGAGC   1
  **|||||||=||||||||||||=|
targets:290   CCGGGGUCGGCGCCAUAGAUCUUG   313

2.5 PREDICTED: Zea mays pollen-specific leucine-rich repeat extensin-like protein 1 (LOC109939828), mRNA NA coding protein psRNATarget