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BaseInfo

ncRNA ID novel_zma_miR7405
Species Zea mays
Class miRNA
Genome position Chr4:77126401-77126508 [+]
Reference genome RefGen_v4
Source SRR1583942
Length 22
Mature sequence(if miRNA) 1 - UGUGAUCGAUCUCUCAAAUGUA - 22
Stem-loop(if miRNA) --   G      -CUC       --U   UUG   UU  CUAC        C U   GC
  UGU AUCGAU    UCAAAUG   AGC   AAG  GA    GCAUGUGU G GCU  A
  ||| ||||||    |||||||   |||   |||  ||    |||||||| | |||  U
  ACG UAGUUA    AGUUUAU   UCG   UUC  CU    CGUAUACA C UGG  C
UU   -      UUAU       UUU   -UA   --  ----        U U   UU
Stem-loop sequence UGUGAUCGAUCUCUCAAAUGUAGCUUGAAGUUGACUACGCAUGUGUCGUGCUGCAUCUUGGUUCUACAUAUGCUCCUUAUGCUUUUUAUUUGAUAUUAUUGAUGCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU954029.1
ncRNA:22   AUGUAAACUCUCUAGCUAGUGU   1
  |||||*|*|||||||||||||*
targets:290   UACAUAUCAGAGAUCGAUCACC   311

3.0 Zea mays clone 1452132 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU953543.1
ncRNA:22   AUGUAAACUCUCUAGCUAGUGU   1
  *||||*|*|||||||||||||*
targets:298   CACAUAUCAGAGAUCGAUCACC   319

3.0 Zea mays clone 1432492 hypothetical protein mRNA, complete cds NA coding protein psRNATarget