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BaseInfo

ncRNA ID	novel_zma_miR7398
Species	Zea mays
Class	miRNA
Genome position	Chr1:248211540-248211592 [-]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - GUCGAGCUGGCUCGUUAAUGAACC - 24
Stem-loop(if miRNA)	--    AGC        UG      G U   UUCG   UAACGAGC  GCUCGA C C   ||||   ||||||||  |||||| |   AAGU   AUUGCUCG  CGAGCU G G CC    --A        GU      - U
Stem-loop sequence	UUCGAGCUAACGAGCUGGCUCGAGCUCGUGUCGAGCUGGCUCGUUAAUGAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT035639.1	ncRNA:24   CCAAGUAAUUGCUCGGUCGAGCUG   1   |||||=|||||||||||||||||| targets:160   GGUUCGUUAACGAGCCAGCUCGAC   183 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0073N19 mRNA, complete cds	NA	coding protein	psRNATarget
EU949807.1	ncRNA:24   CCAA-GUAAUUGCUCGGUCGAGCUG   1   *|||-=*|||||||||||||||||* targets:771   CGUUAUCUUAACGAGCCAGCUCGAG   795 Target Full Sequence	2.0	Zea mays clone 446253 mRNA sequence	NA	coding protein	psRNATarget
BT063603.1	ncRNA:24   CCAA-GUAAUUGCUCGGUCGAGCUG   1   *|||-|=*||||||||||||||||* targets:1494   CGUUACGAUAACGAGCCAGCUCGAG   1518 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0084K15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174850.1	ncRNA:24   CCAA-GUAAUUGCUCGGUCGAGCUG   1   *|||-|=*||||||||||||||||* targets:1576   CGUUACGAUAACGAGCCAGCUCGAG   1600 Target Full Sequence	3.0	Zea mays xylulose kinase-1 (LOC100382087), mRNA	NA	coding protein	psRNATarget
BT063106.1	ncRNA:24   CCAA-GUAAUUGCUCGGUCGAGCUG   1   *|||-|=*||||||||||||||||* targets:1576   CGUUACGAUAACGAGCCAGCUCGAG   1600 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0026H14 mRNA, complete cds	NA	coding protein	psRNATarget