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BaseInfo

ncRNA ID novel_zma_miR7395
Species Zea mays
Class miRNA
Genome position Chr1:249902967-249903027 [+]
Reference genome RefGen_v4
Source SRR2647391;SRR5105959
Length 24
Mature sequence(if miRNA) 38 - ACAAAACUGGAACAGAACGGCUCC - 61
Stem-loop(if miRNA) --    A   C          CU    AAC
  AGUC UUC GUUCUAGUUU  UUGU   C
  |||| ||| ||||||||||  ||||   A
  UCGG AAG CAAGGUCAAA  AACG   A
CC    C   A          AC    ACA
Stem-loop sequence AGUCAUUCCGUUCUAGUUUCUUUGUAACCAAACAGCAACAAAACUGGAACAGAACGGCUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT087211.1
ncRNA:24   CCUCGGCAAGACAAGGUCAAAACA   1
  |*||||||||||||||||||||||
targets:507   GAAGCCGUUCUGUUCCAGUUUUGU   530

0.0 Zea mays full-length cDNA clone ZM_BFb0001A11 mRNA, complete cds NA coding protein psRNATarget
XM_020542520.1
ncRNA:24   CCUCGGCAAGACAAGGUCAAAACA   1
  |*||||||||||||||||||||||
targets:1505   GAAGCCGUUCUGUUCCAGUUUUGU   1528

0.0 PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA NA coding protein psRNATarget