ncRNA ID | novel_zma_miR7392 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:31743662-31743893 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647391 |
Length | 24 |
Mature sequence(if miRNA) | 209 - UUUCCACUGGCGGUUUCUUAAGCC - 232 |
Stem-loop(if miRNA) |
-C     -                                                                                  AA  UAAGA                U   UUUAA AAAUCGCCAGUGGAAACCUAUUUCCACUGGCGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU  GU     UAACCGCCAGUGGAAA A   ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||     ||||||||||||||||   GAAUU UUUGGCGGUCACCUUUGGAUAAAGGUGACCGCCAAUAGAAUUGUGUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA  CA     GUUGGCGGUCACCUUU G CC     C                                                                                  CA  UUGUG                G |
Stem-loop sequence | CUUUAAAAAUCGCCAGUGGAAACCUAUUUCCACUGGCGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAUAGGUUUCCACUGGCGGUUUCUUAAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU960305.1 |
|
2.5 | Zea mays clone 223391 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001150001.1 |
|
2.5 | Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA | NA | coding protein | psRNATarget |