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BaseInfo

ncRNA ID	novel_zma_miR7391
Species	Zea mays
Class	miRNA
Genome position	Chr9:26338027-26338175 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	126 - GACGUUAGAUCUAAGAUGGAUAGU - 149
Stem-loop(if miRNA)	--C   A                 A     AA A              -----    AAACCUUUACUGCUAUCUCC    AUC AUCUUAGAUCUAACGUC UUUAC  C UUGUAUAUUUUGCA     UAAA                    A    ||| ||||||||||||||||| |||||  | ||||||||||||||     ||||    UAG UAGAAUCUAGAUUGCAG GAAUG  G GAUAUAUAAAAUGU     GUGA                    C UGA   G                 G     AC C              UUCUU    GAAGCUCAUUCCGCUUUUAC
Stem-loop sequence	CAUCAAUCUUAGAUCUAACGUCAUUUACAACAUUGUAUAUUUUGCAUAAAAAACCUUUACUGCUAUCUCCACCAUUUUCGCCUUACUCGAAGAGUGUUCUUUGUAAAAUAUAUAGCGCAGUAAGGGACGUUAGAUCUAAGAUGGAUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664116.2	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*==||||||||||||||||| targets:677   ACCACUUAUCUUAGAUCUAACGUC   700 Target Full Sequence	2.0	PREDICTED: Zea mays 4-alpha-L-fucosyltransferase (a4Lea), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT087210.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:339   ACCACUCAUUUUAGAUCUAACGUC   362 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
JB163844.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:13   ACCACUCAUUUUAGAUCUAACGUC   36 Target Full Sequence	2.0	Sequence 1508 from Patent EP2559767	NA	coding protein	psRNATarget
HI403383.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:13   ACCACUCAUUUUAGAUCUAACGUC   36 Target Full Sequence	2.0	Sequence 1508 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235513.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:13   ACCACUCAUUUUAGAUCUAACGUC   36 Target Full Sequence	2.0	Sequence 1508 from Patent EP2985353	NA	coding protein	psRNATarget
HI403224.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:13   ACCACUCAUUUUAGAUCUAACGUC   36 Target Full Sequence	2.0	Sequence 1349 from Patent EP2074227	NA	coding protein	psRNATarget
JB163685.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:13   ACCACUCAUUUUAGAUCUAACGUC   36 Target Full Sequence	2.0	Sequence 1349 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235354.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||| targets:13   ACCACUCAUUUUAGAUCUAACGUC   36 Target Full Sequence	2.0	Sequence 1349 from Patent EP2985353	NA	coding protein	psRNATarget
EU948462.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   |*||*==||=|||||||||||||| targets:436   AAUACUUAUUUUAGAUCUAACGUC   459 Target Full Sequence	3.0	Zea mays clone 377988 mRNA sequence	NA	coding protein	psRNATarget
JB170004.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||= targets:17   ACCACUCAUUUUAGAUCUAACGUU   40 Target Full Sequence	3.0	Sequence 7668 from Patent EP2559767	NA	coding protein	psRNATarget
HI409543.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||= targets:17   ACCACUCAUUUUAGAUCUAACGUU   40 Target Full Sequence	3.0	Sequence 7668 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241673.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*|*=|||=|||||||||||||= targets:17   ACCACUCAUUUUAGAUCUAACGUU   40 Target Full Sequence	3.0	Sequence 7668 from Patent EP2985353	NA	coding protein	psRNATarget
HI403282.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*=*=|||=|||||||||||||| targets:17   ACCGCUCAUUUUAGAUCUAACGUC   40 Target Full Sequence	2.0	Sequence 1407 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235412.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*=*=|||=|||||||||||||| targets:17   ACCGCUCAUUUUAGAUCUAACGUC   40 Target Full Sequence	2.0	Sequence 1407 from Patent EP2985353	NA	coding protein	psRNATarget
JB163743.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   ||*=*=|||=|||||||||||||| targets:17   ACCGCUCAUUUUAGAUCUAACGUC   40 Target Full Sequence	2.0	Sequence 1407 from Patent EP2559767	NA	coding protein	psRNATarget
BT016456.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   |=*|*||*|||||||||||||||| targets:42   AUCACCCUUCUUAGAUCUAACGUC   65 Target Full Sequence	1.0	Zea mays clone Contig289 mRNA sequence	NA	coding protein	psRNATarget
EU955849.1	ncRNA:24   UGAUAGGUAGAAUCUAGAUUGCAG   1   =|***|||||||*||||||||||| targets:1974   GCCCACCAUCUUUGAUCUAACGUC   1997 Target Full Sequence	1.5	Zea mays clone 1548842 mRNA sequence	NA	coding protein	psRNATarget