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BaseInfo

ncRNA ID	novel_zma_miR7385
Species	Zea mays
Class	miRNA
Genome position	Chr9:13147579-13147666 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - CUACUCCCUCCGUUUAUUUUUAUU - 24
Stem-loop(if miRNA)	--C    C         A                       CAA    UACU CCUCCGUUU UUUUUAUUUGUCGCUGGAUAGUG   U    |||| ||||||||| |||||||||||||||||||||||    AUGA GGAGGCAAA AAAAAUAAACAGCGACCUAUCAC   U UUU    A         G                       AUU
Stem-loop sequence	CUACUCCCUCCGUUUAUUUUUAUUUGUCGCUGGAUAGUGCAAUUUUACACUAUCCAGCGACAAAUAAAAAGAAACGGAGGAAGUAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT063269.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||||=|||||||||||||| targets:353   AAUAAAAAUGAACGGAGGGAGUAG   376 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0045K17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174891.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||||=|||||||||||||| targets:353   AAUAAAAAUGAACGGAGGGAGUAG   376 Target Full Sequence	1.0	Zea mays arginine/serine-rich splicing factor RS2Z37A transcript I (RS2Z37A), mRNA	NA	coding protein	psRNATarget
KC424999.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||||=|||||||||||||| targets:358   AAUAAAAAUGAACGGAGGGAGUAG   381 Target Full Sequence	1.0	Zea mays arginine/serine-rich splicing factor RS2Z37A transcript III (RS2Z37A) mRNA, RS2Z37AIII allele, complete cds, alternatively spliced	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||| targets:1384   AAUAAAAAGAAACGGAGGGAGUAG   1407 Target Full Sequence	1.0	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||| targets:2496   AAUAAAAAGAAACGGAGGGAGUAG   2519 Target Full Sequence	1.0	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
JB163740.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*|||=||||||||||| targets:72   AAUAAAAAGAAAUGGAGGGAGUAG   95 Target Full Sequence	2.5	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*|||=||||||||||| targets:72   AAUAAAAAGAAAUGGAGGGAGUAG   95 Target Full Sequence	2.5	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
HI403279.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*|||=||||||||||| targets:72   AAUAAAAAGAAAUGGAGGGAGUAG   95 Target Full Sequence	2.5	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
JB170476.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAU   88 Target Full Sequence	2.0	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
HI410015.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAU   88 Target Full Sequence	2.0	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAU   88 Target Full Sequence	2.0	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:65   AAUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237990.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:66   AAUAAAAAAAAACGGAGGGAGUAC   89 Target Full Sequence	2.0	Sequence 3985 from Patent EP2985353	NA	coding protein	psRNATarget
JB166321.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:66   AAUAAAAAAAAACGGAGGGAGUAC   89 Target Full Sequence	2.0	Sequence 3985 from Patent EP2559767	NA	coding protein	psRNATarget
HI405860.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:66   AAUAAAAAAAAACGGAGGGAGUAC   89 Target Full Sequence	2.0	Sequence 3985 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240753.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:70   AAUAAAAAGAAACGGAGGGAGUAC   93 Target Full Sequence	2.0	Sequence 6748 from Patent EP2985353	NA	coding protein	psRNATarget
JB169084.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:70   AAUAAAAAGAAACGGAGGGAGUAC   93 Target Full Sequence	2.0	Sequence 6748 from Patent EP2559767	NA	coding protein	psRNATarget
HI408623.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:70   AAUAAAAAGAAACGGAGGGAGUAC   93 Target Full Sequence	2.0	Sequence 6748 from Patent EP2074227	NA	coding protein	psRNATarget
EZ067019.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:8   AAUAAAAAGAAACGGAGGGAGUAA   31 Target Full Sequence	2.0	TSA: Zea mays contig02653, mRNA sequence	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:558   AAUAAAAAGAAACGGAGGGAGUAC   581 Target Full Sequence	2.0	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:154   AAUAAAAAGAAACGGAGGGAGUAA   177 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU973473.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:710   AAUAAAAAGAAACGGAGGGAGUAU   733 Target Full Sequence	2.0	Zea mays clone 399411 mRNA sequence	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:630   AAUAAAAAGAAACGGAGGGAGUAC   653 Target Full Sequence	2.0	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:630   AAUAAAAAGAAACGGAGGGAGUAC   653 Target Full Sequence	2.0	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:291   AAUAAAAAGAAACGGAGGGAGUAU   314 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
BT037092.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1145   AAUAAAAAGAAACGGAGGGAGUAC   1168 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1145   AAUAAAAAGAAACGGAGGGAGUAC   1168 Target Full Sequence	2.0	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1227   AAUAAAAAGAAACGGAGGGAGUAU   1250 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1349   AAUAAAAAGAAACGGAGGGAGUAC   1372 Target Full Sequence	2.0	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1349   AAUAAAAAGAAACGGAGGGAGUAC   1372 Target Full Sequence	2.0	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:202   AAUAAAAAGAAACGGAGGGAGUAA   225 Target Full Sequence	2.0	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1416   AAUAAAAAGAAACGGAGGGAGUAU   1439 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1333   AAUAAAAAGAAACGGAGGGAGUAU   1356 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT043433.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1406   AAUAAAAAGAAACGGAGGGAGUAU   1429 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1588   AAUAAAAAGAAACGGAGGGAGUAU   1611 Target Full Sequence	2.0	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1604   AAUAAAAAGAAACGGAGGGAGUAU   1627 Target Full Sequence	2.0	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1661   AAUAAAAAGAAACGGAGGGAGUAU   1684 Target Full Sequence	2.0	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1869   AAUAAAAAGAAACGGAGGGAGUAU   1892 Target Full Sequence	2.0	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
EU957018.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2061   AAUAAAAAGAAACGGAGGGAGUAC   2084 Target Full Sequence	2.0	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2036   AAUAAAAAGAAACGGAGGGAGUAC   2059 Target Full Sequence	2.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2103   AAUAAAAAGAAACGGAGGGAGUAC   2126 Target Full Sequence	2.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2557   AAUAAAAAGAAACGGAGGGAGUAU   2580 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:1524   AAUAAAAAGAAACGGAGGGAGUAU   1547 Target Full Sequence	2.0	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2857   AAUAAAAAGAAACGGAGGGAGUAC   2880 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2874   AAUAAAAAGAAACGGAGGGAGUAC   2897 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:2980   AAUAAAAAGAAACGGAGGGAGUAC   3003 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:174   AAUAAAAAGAAACGGAGGGAGUAA   197 Target Full Sequence	2.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544903.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:3202   AAUAAAAAGAAACGGAGGGAGUAC   3225 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544902.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:3211   AAUAAAAAGAAACGGAGGGAGUAC   3234 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||||||||* targets:3759   AAUAAAAAGAAACGGAGGGAGUAC   3782 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI407230.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||| targets:66   AACUAAAAAGAAACGGAGGGAGUAG   90 Target Full Sequence	1.0	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
JB167691.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||| targets:66   AACUAAAAAGAAACGGAGGGAGUAG   90 Target Full Sequence	1.0	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||| targets:66   AACUAAAAAGAAACGGAGGGAGUAG   90 Target Full Sequence	1.0	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |=||||||*||||||||||||||* targets:65   AGUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |=||||||*||||||||||||||* targets:65   AGUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |=||||||*||||||||||||||* targets:65   AGUAAAAAGAAACGGAGGGAGUAC   88 Target Full Sequence	2.0	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
EZ084539.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:78   AAUAAAAAAGAACGGAGGGAGUAC   101 Target Full Sequence	3.0	TSA: Zea mays contig20183, mRNA sequence	NA	coding protein	psRNATarget
EZ054538.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:6   AAUAAAAAAGAACGGAGGGAGUAU   29 Target Full Sequence	3.0	TSA: Zea mays contig55660, mRNA sequence	NA	coding protein	psRNATarget
EZ091447.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:124   AAUAAAAAAGAACGGAGGGAGUAU   147 Target Full Sequence	3.0	TSA: Zea mays contig27095, mRNA sequence	NA	coding protein	psRNATarget
BT017193.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:1013   AAUAAAAAAGAACGGAGGGAGUAU   1036 Target Full Sequence	3.0	Zea mays clone EL01N0371C09.c mRNA sequence	NA	coding protein	psRNATarget
EU965353.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:1081   AAUAAAAAAGAACGGAGGGAGUAU   1104 Target Full Sequence	3.0	Zea mays clone 285514 CAPIP1 mRNA, complete cds	NA	coding protein	psRNATarget
BT083888.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:1165   AAUAAAAAAGAACGGAGGGAGUAA   1188 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0051D08 mRNA, complete cds	NA	coding protein	psRNATarget
BT040068.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:976   AAUAAAAAAGAACGGAGGGAGUAU   999 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0063E17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147497.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:976   AAUAAAAAAGAACGGAGGGAGUAU   999 Target Full Sequence	3.0	Zea mays CAPIP1 (LOC100273048), mRNA	NA	coding protein	psRNATarget
NM_001177150.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:1316   AAUAAAAAAGAACGGAGGGAGUAA   1339 Target Full Sequence	3.0	Zea mays hypothetical protein (umc1687), mRNA	NA	coding protein	psRNATarget
BT042757.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:1333   AAUAAAAAAGAACGGAGGGAGUAA   1356 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0037D18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148677.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:1333   AAUAAAAAAGAACGGAGGGAGUAA   1356 Target Full Sequence	3.0	Zea mays hypothetical protein (umc1687), mRNA	NA	coding protein	psRNATarget
BT054648.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:108   AAUAAAAAAGAACGGAGGGAGUAA   131 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0028L02 mRNA, complete cds	NA	coding protein	psRNATarget
BT034926.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:963   AAUAAAAAAGAACGGAGGGAGUAU   986 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0028J24 mRNA, complete cds	NA	coding protein	psRNATarget
EU957483.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||=*||||||||||||||* targets:2000   AAUAAAAGAAAACGGAGGGAGUAA   2023 Target Full Sequence	3.0	Zea mays clone 1594285 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546478.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:2980   AAUAAAAAAGAACGGAGGGAGUAU   3003 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100194233 (LOC100194233), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546479.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*=|||||||||||||* targets:2980   AAUAAAAAAGAACGGAGGGAGUAU   3003 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC100194233 (LOC100194233), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ061437.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||*||||||||*|||||| targets:229   AAUAAAAAGAAACGGAGAGAGUAG   252 Target Full Sequence	2.5	TSA: Zea mays contig62559, mRNA sequence	NA	coding protein	psRNATarget
XM_020553254.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||||||**|||||||||||||| targets:749   AAUAAAAAAUAACGGAGGGAGUAG   772 Target Full Sequence	2.0	PREDICTED: Zea mays putative phototropic-resoponsive NPH3 family protein (LOC100278373), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EZ110367.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||=|||*=|||||||||||||* targets:482   AAUAGAAAAGAACGGAGGGAGUAU   505 Target Full Sequence	3.0	TSA: Zea mays contig46027, mRNA sequence	NA	coding protein	psRNATarget
EU965768.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||=|||*=|||||||||||||* targets:725   AAUAGAAAAGAACGGAGGGAGUAU   748 Target Full Sequence	3.0	Zea mays clone 288771 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150624.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   ||||=|||*=|||||||||||||* targets:725   AAUAGAAAAGAACGGAGGGAGUAU   748 Target Full Sequence	3.0	Zea mays uncharacterized LOC100276931 (pco107283), mRNA	NA	coding protein	psRNATarget
EZ107158.1	ncRNA:24   UUAU-UUUUAUUUGCCUCCCUCAUC   1   ||||-||||*||||||||||||||* targets:74   AAUAUAAAAAAAACGGAGGGAGUAC   98 Target Full Sequence	2.0	TSA: Zea mays contig42816, mRNA sequence	NA	coding protein	psRNATarget
BT062468.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:631   AACUAAAAAGAAACGGAGGGAGUAC   655 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656230.2	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:47   AACUAAAAAGAAACGGAGGGAGUAU   71 Target Full Sequence	2.0	PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:1222   AACUAAAAAGAAACGGAGGGAGUAU   1246 Target Full Sequence	2.0	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
BT065586.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-|||||||||||*|||||||||* targets:1670   AACUAAAAAUAAACAGAGGGAGUAU   1694 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0315O03 mRNA, complete cds	NA	coding protein	psRNATarget
EU964807.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:1575   AACUAAAAAGAAACGGAGGGAGUAC   1599 Target Full Sequence	2.0	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:1575   AACUAAAAAGAAACGGAGGGAGUAC   1599 Target Full Sequence	2.0	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:1211   AACUAAAAAGAAACGGAGGGAGUAU   1235 Target Full Sequence	2.0	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU975832.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-|||||||||||*|||||||||* targets:1680   AACUAAAAAUAAACAGAGGGAGUAU   1704 Target Full Sequence	2.5	Zea mays clone 502363 CAAX prenyl protease 1 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001159032.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-|||||||||||*|||||||||* targets:1680   AACUAAAAAUAAACAGAGGGAGUAU   1704 Target Full Sequence	2.5	Zea mays CAAX prenyl protease 1 (LOC100286144), mRNA	NA	coding protein	psRNATarget
XM_008645651.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-|||||||||||*|||||||||* targets:1705   AACUAAAAAUAAACAGAGGGAGUAU   1729 Target Full Sequence	2.5	PREDICTED: Zea mays CAAX prenyl protease 1 (LOC100286144), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020551485.1	ncRNA:24   UU-AUUUUUAUUUGCCUCCCUCAUC   1   ||-||||||*||||||||||||||* targets:2588   AACUAAAAAGAAACGGAGGGAGUAC   2612 Target Full Sequence	2.0	PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB169789.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAC   88 Target Full Sequence	3.0	Sequence 7453 from Patent EP2559767	NA	coding protein	psRNATarget
HI410196.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAA   88 Target Full Sequence	3.0	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
HI409328.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAC   88 Target Full Sequence	3.0	Sequence 7453 from Patent EP2074227	NA	coding protein	psRNATarget
JB169171.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAA   88 Target Full Sequence	3.0	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAA   88 Target Full Sequence	3.0	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
JB170657.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAA   88 Target Full Sequence	3.0	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241458.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAC   88 Target Full Sequence	3.0	Sequence 7453 from Patent EP2985353	NA	coding protein	psRNATarget
HI408710.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAA   88 Target Full Sequence	3.0	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||||||**||||||||||||||* targets:65   AAUAAAACGAAACGGAGGGAGUAA   88 Target Full Sequence	3.0	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008666912.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   *|||||||*=|||||||||||||* targets:1816   CAUAAAAAAGAACGGAGGGAGUAU   1839 Target Full Sequence	3.0	PREDICTED: Zea mays LOB domain-containing protein 36 (LOC103643737), mRNA	NA	coding protein	psRNATarget
NM_001152354.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:1960   AAUUAAAAAGAACGGAGGGAGUAU   1983 Target Full Sequence	3.0	Zea mays hypothetical protein (LOC100279333), mRNA	NA	coding protein	psRNATarget
BT054055.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:1960   AAUUAAAAAGAACGGAGGGAGUAU   1983 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0156F17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674470.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:2033   AAUUAAAAAGAACGGAGGGAGUAU   2056 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100279333), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674472.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:2093   AAUUAAAAAGAACGGAGGGAGUAU   2116 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100279333), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008674471.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:2106   AAUUAAAAAGAACGGAGGGAGUAU   2129 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100279333), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674469.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:2116   AAUUAAAAAGAACGGAGGGAGUAU   2139 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100279333), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674473.2	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:2130   AAUUAAAAAGAACGGAGGGAGUAU   2153 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC100279333), transcript variant X5, mRNA	NA	coding protein	psRNATarget
EU956664.1	ncRNA:24   UUAUUUUUAUUUGCCUCCCUCAUC   1   |||*||||*=|||||||||||||* targets:2120   AAUUAAAAAGAACGGAGGGAGUAU   2143 Target Full Sequence	3.0	Zea mays clone 1570160 mRNA sequence	NA	coding protein	psRNATarget