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BaseInfo

ncRNA ID	novel_zma_miR7380
Species	Zea mays
Class	miRNA
Genome position	Chr8:67907309-67907417 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	22
Mature sequence(if miRNA)	88 - UUUCUGUGAGGAAUUUAGUAGG - 109
Stem-loop(if miRNA)	--    UU    A      --     GACAAUCAA     U  -        -UAU        UACU  AUUC CUCGCA  AAGUU         UUAUU GU UUGUCAAA    AUGUCG   ||||  |||| ||||||  |||||         ||||| || ||||||||    |||||A   AUGA  UAAG GAGUGU  UUCAA         AGUAA CA GACGGUUU    UACAGC GG    UU    -      CU     ---------     U  U        UUAU
Stem-loop sequence	UACUUUAUUCACUCGCAAAGUUGACAAUCAAUUAUUUGUUUGUCAAAUAUAUGUCGACGACAUUAUUUUUGGCAGUACUAAUGAAACUUUCUGUGAGGAAUUUAGUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ110813.1	ncRNA:22   GGAUGAUUUAAGGAGUGUCUUU   1   ==|=|||=*||||||||||||| targets:126   UUUGCUAGUUUCCUCACAGAAA   147 Target Full Sequence	3.0	TSA: Zea mays contig46474, mRNA sequence	NA	coding protein	psRNATarget
AY105662.1	ncRNA:22   GGAUGAUUUAAGGAGUGUCUUU   1   ==|=|||=*||||||||||||| targets:780   UUUGCUAGUUUCCUCACAGAAA   801 Target Full Sequence	3.0	Zea mays PCO112379 mRNA sequence	NA	coding protein	psRNATarget
NM_001291620.1	ncRNA:22   GGAUGAUUUAAGGAGUGUCUUU   1   ==|=|||=*||||||||||||| targets:807   UUUGCUAGUUUCCUCACAGAAA   828 Target Full Sequence	3.0	Zea mays dehydrogenase/reductase SDR family member 2 (LOC100282854), mRNA	NA	coding protein	psRNATarget
BT069696.1	ncRNA:22   GGAUGAUUUAAGGAGUGUCUUU   1   ==|=|||=*||||||||||||| targets:807   UUUGCUAGUUUCCUCACAGAAA   828 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0208D04 mRNA, complete cds	NA	coding protein	psRNATarget
EU962534.1	ncRNA:22   GGAUGAUUUAAGGAGUGUCUUU   1   ==|=|||=*||||||||||||| targets:730   UUUGCUAGUUUCCUCACAGAAA   751 Target Full Sequence	3.0	Zea mays clone 243508 dehydrogenase/reductase SDR family member 2 mRNA, complete cds	NA	coding protein	psRNATarget