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BaseInfo

ncRNA ID	novel_zma_miR7376
Species	Zea mays
Class	miRNA
Genome position	Chr8:58315446-58315566 [-]
Reference genome	RefGen_v4
Source	SRR2647391
Length	23
Mature sequence(if miRNA)	99 - UGGAUCGUUGUCUUCAUAUGAUA - 121
Stem-loop(if miRNA)	---U      UU     -        AUAACUAUUUAA    UUUGUAUAGAACUCCAUUAUAUAUU     GGAUCG  GUCUU CAUAUGAU            CUAU                         A     ||||||  ||||| ||||||||            ||||                         A     CCUAGU  CAGAG GUGUACUA            UGAG                         A CGAU      -U     U        -----------C    AACCAUGUUUUUGUUUACAGUGUAG
Stem-loop sequence	UGGAUCGUUGUCUUCAUAUGAUAUAACUAUUUAACUAUUUUGUAUAGAACUCCAUUAUAUAUUAAAGAUGUGACAUUUGUUUUUGUACCAAGAGUCAUCAUGUGUGAGACUUGAUCCUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940976.1	ncRNA:23   AUAGUAUACUUCUGUUGCUAGGU   1   *|||||||||||||||||||||| targets:26   CAUCAUAUGAAGACAACGAUCCA   48 Target Full Sequence	0.0	Zea mays clone 1226050 mRNA sequence	NA	coding protein	psRNATarget
NM_001350811.1	ncRNA:23   AUAGUAUACUUCUGUUGCUAGGU   1   |||||||*||||||||||||||| targets:2929   UAUCAUACGAAGACAACGAUCCA   2951 Target Full Sequence	1.0	Zea mays uncharacterized LOC100278071 (LOC100278071), mRNA	NA	coding protein	psRNATarget
EZ078334.1	ncRNA:23   AUAGUAUACUUCUGUUGCUAGGU   1   *||||||*||||||||||||||| targets:57   CAUCAUAAGAAGACAACGAUCCA   79 Target Full Sequence	1.0	TSA: Zea mays contig13973, mRNA sequence	NA	coding protein	psRNATarget
EZ086644.1	ncRNA:23   AUAGUAUACUUCUGUUGCUAGGU   1   *||||||||||||||||||||*| targets:51   CAUCAUAUGAAGACAACGAUCGA   73 Target Full Sequence	1.5	TSA: Zea mays contig22290, mRNA sequence	NA	coding protein	psRNATarget
EZ057552.1	ncRNA:23   AUAGUAUACUUCUGUUGCUAGGU   1   *||||||*||||||||||||||* targets:84   CAUCAUACGAAGACAACGAUCCC   106 Target Full Sequence	2.0	TSA: Zea mays contig58674, mRNA sequence	NA	coding protein	psRNATarget
XM_008680517.2	ncRNA:23   AU--AGUAUACUUCUGUUGCUAGGU   1   ||--||||||||*|||||||||||* targets:8107   UACUUCAUAUGACGACAACGAUCCU   8131 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g65560 (LOC103653689), mRNA	NA	coding protein	psRNATarget